• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

噬菌体T7基因2.5单链DNA结合蛋白C末端的必需残基。

Essential residues in the C terminus of the bacteriophage T7 gene 2.5 single-stranded DNA-binding protein.

作者信息

Marintcheva Boriana, Hamdan Samir M, Lee Seung-Joo, Richardson Charles C

机构信息

Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, USA.

出版信息

J Biol Chem. 2006 Sep 1;281(35):25831-40. doi: 10.1074/jbc.M604601200. Epub 2006 Jun 28.

DOI:10.1074/jbc.M604601200
PMID:16807232
Abstract

Gene 2.5 of bacteriophage T7 encodes a single-stranded DNA (ssDNA)-binding protein (gp2.5) that is an essential component of the phage replisome. Similar to other prokaryotic ssDNA-binding proteins, gp2.5 has an acidic C terminus that is involved in protein-protein interactions at the replication fork and in modulation of the ssDNA binding properties of the molecule. We have used genetic and biochemical approaches to identify residues critical for the function of the C terminus of gp2.5. The presence of an aromatic residue in the C-terminal position is essential for gp2.5 function. Deletion of the C-terminal residue, phenylalanine, is detrimental to its function, as is the substitution of this residue with non-aromatic amino acids. Placing the C-terminal phenylalanine in the penultimate position also results in loss of function. Moderate shortening of the length of the acidic portion of the C terminus is tolerated when the aromatic nature of the C-terminal residue is preserved. Gradual removal of the acidic C terminus of gp2.5 results in a higher affinity for ssDNA and a decreased ability to interact with T7 DNA polymerase/thioredoxin. The replacement of the charged residues in the C terminus with neutral amino acids abolishes gp2.5 function. Our data show that both the C-terminal aromatic residue and the overall acidic charge of the C terminus of gp2.5 are critical for its function.

摘要

噬菌体T7的基因2.5编码一种单链DNA(ssDNA)结合蛋白(gp2.5),它是噬菌体复制体的一个重要组成部分。与其他原核生物的ssDNA结合蛋白类似,gp2.5有一个酸性的C末端,该末端参与复制叉处的蛋白质-蛋白质相互作用以及分子ssDNA结合特性的调节。我们利用遗传学和生物化学方法来确定对gp2.5 C末端功能至关重要的残基。C末端位置存在一个芳香族残基对gp2.5的功能至关重要。删除C末端残基苯丙氨酸对其功能有害,用非芳香族氨基酸取代该残基也如此。将C末端苯丙氨酸置于倒数第二个位置也会导致功能丧失。当C末端残基的芳香族性质得以保留时,C末端酸性部分长度的适度缩短是可以耐受的。逐渐去除gp2.5的酸性C末端会导致对ssDNA的亲和力增加以及与T7 DNA聚合酶/硫氧还蛋白相互作用的能力下降。用中性氨基酸取代C末端的带电荷残基会使gp2.5功能丧失。我们的数据表明,gp2.5的C末端芳香族残基和C末端的整体酸性电荷对其功能都至关重要。

相似文献

1
Essential residues in the C terminus of the bacteriophage T7 gene 2.5 single-stranded DNA-binding protein.噬菌体T7基因2.5单链DNA结合蛋白C末端的必需残基。
J Biol Chem. 2006 Sep 1;281(35):25831-40. doi: 10.1074/jbc.M604601200. Epub 2006 Jun 28.
2
Structure of the gene 2.5 protein, a single-stranded DNA binding protein encoded by bacteriophage T7.基因2.5蛋白的结构,该蛋白是由噬菌体T7编码的一种单链DNA结合蛋白。
Proc Natl Acad Sci U S A. 2001 Aug 14;98(17):9557-62. doi: 10.1073/pnas.171317698. Epub 2001 Jul 31.
3
The carboxyl-terminal domain of bacteriophage T7 single-stranded DNA-binding protein modulates DNA binding and interaction with T7 DNA polymerase.噬菌体T7单链DNA结合蛋白的羧基末端结构域可调节DNA结合以及与T7 DNA聚合酶的相互作用。
J Biol Chem. 2003 Aug 8;278(32):29538-45. doi: 10.1074/jbc.M304318200. Epub 2003 May 24.
4
The DNA binding domain of the gene 2.5 single-stranded DNA-binding protein of bacteriophage T7.噬菌体T7基因2.5单链DNA结合蛋白的DNA结合结构域。
J Biol Chem. 2003 Feb 28;278(9):7247-56. doi: 10.1074/jbc.M210605200. Epub 2002 Dec 20.
5
Mutations in the gene 5 DNA polymerase of bacteriophage T7 suppress the dominant lethal phenotype of gene 2.5 ssDNA binding protein lacking the C-terminal phenylalanine.噬菌体T7的基因5 DNA聚合酶中的突变抑制了缺乏C末端苯丙氨酸的基因2.5单链DNA结合蛋白的显性致死表型。
Mol Microbiol. 2009 May;72(4):869-80. doi: 10.1111/j.1365-2958.2009.06682.x. Epub 2009 Mar 30.
6
Acidic carboxyl-terminal domain of gene 2.5 protein of bacteriophage T7 is essential for protein-protein interactions.噬菌体T7基因2.5蛋白的酸性羧基末端结构域对于蛋白质-蛋白质相互作用至关重要。
J Biol Chem. 1994 Feb 18;269(7):5270-8.
7
Two modes of interaction of the single-stranded DNA-binding protein of bacteriophage T7 with the DNA polymerase-thioredoxin complex.T7 噬菌体单链 DNA 结合蛋白与 DNA 聚合酶-硫氧还蛋白复合物的两种相互作用模式。
J Biol Chem. 2010 Jun 4;285(23):18103-12. doi: 10.1074/jbc.M110.107656. Epub 2010 Apr 6.
8
Single molecule force spectroscopy of salt-dependent bacteriophage T7 gene 2.5 protein binding to single-stranded DNA.盐依赖性噬菌体T7基因2.5蛋白与单链DNA结合的单分子力谱分析
J Biol Chem. 2006 Dec 15;281(50):38689-96. doi: 10.1074/jbc.M608460200. Epub 2006 Oct 17.
9
C-terminal phenylalanine of bacteriophage T7 single-stranded DNA-binding protein is essential for strand displacement synthesis by T7 DNA polymerase at a nick in DNA.噬菌体T7单链DNA结合蛋白的C末端苯丙氨酸对于T7 DNA聚合酶在DNA切口处进行链置换合成至关重要。
J Biol Chem. 2009 Oct 30;284(44):30339-49. doi: 10.1074/jbc.M109.024059. Epub 2009 Sep 2.
10
Role of the acidic carboxyl-terminal domain of the single-stranded DNA-binding protein of bacteriophage T7 in specific protein-protein interactions.噬菌体T7单链DNA结合蛋白酸性羧基末端结构域在特定蛋白质-蛋白质相互作用中的作用
J Biol Chem. 1998 Mar 13;273(11):6556-64. doi: 10.1074/jbc.273.11.6556.

引用本文的文献

1
Mechanism of strand displacement DNA synthesis by the coordinated activities of human mitochondrial DNA polymerase and SSB.人线粒体 DNA 聚合酶和 SSB 的协调活动引发链置换 DNA 合成的机制。
Nucleic Acids Res. 2023 Feb 28;51(4):1750-1765. doi: 10.1093/nar/gkad037.
2
An Adenosine Triphosphate- Dependent 5'-3' DNA Helicase From sk1-Like F13 Phage.一种来自类sk1 F13噬菌体的依赖三磷酸腺苷的5'-3' DNA解旋酶
Front Microbiol. 2022 Mar 15;13:840219. doi: 10.3389/fmicb.2022.840219. eCollection 2022.
3
Positioning the Model Bacterial Organelle, the Carboxysome.
定位模式细菌细胞器,即羧化体。
mBio. 2021 May 11;12(3):e02519-19. doi: 10.1128/mBio.02519-19.
4
The McdAB system positions α-carboxysomes in proteobacteria.McdAB 系统将 α-羧酶体定位在变形菌中。
Mol Microbiol. 2021 Jul;116(1):277-297. doi: 10.1111/mmi.14708. Epub 2021 Mar 8.
5
TSGIT: An N- and C-terminal tandem tag system for purification of native and intein-mediated ligation-ready proteins.TSGIT:一种用于纯化天然和内含肽介导的连接就绪蛋白的 N 端和 C 端串联标签系统。
Protein Sci. 2021 Feb;30(2):497-512. doi: 10.1002/pro.3989. Epub 2020 Nov 16.
6
Origin and Evolution of Carboxysome Positioning Systems in Cyanobacteria.蓝藻中羧体定位系统的起源和进化。
Mol Biol Evol. 2020 May 1;37(5):1434-1451. doi: 10.1093/molbev/msz308.
7
Combined Solution and Crystal Methods Reveal the Electrostatic Tethers That Provide a Flexible Platform for Replication Activities in the Bacteriophage T7 Replisome.联合溶液法和晶体学方法揭示了在噬菌体 T7 复制体中提供复制活动的灵活平台的静电束缚。
Biochemistry. 2019 Nov 12;58(45):4466-4479. doi: 10.1021/acs.biochem.9b00525. Epub 2019 Nov 4.
8
Gp2.5, the multifunctional bacteriophage T7 single-stranded DNA binding protein.Gp2.5,多功能噬菌体 T7 单链 DNA 结合蛋白。
Semin Cell Dev Biol. 2019 Feb;86:92-101. doi: 10.1016/j.semcdb.2018.03.018. Epub 2018 Mar 28.
9
Mechanisms of mutagenesis: DNA replication in the presence of DNA damage.诱变机制:有 DNA 损伤时的 DNA 复制。
Mutat Res Rev Mutat Res. 2016 Apr-Jun;768:53-67. doi: 10.1016/j.mrrev.2016.03.006. Epub 2016 Apr 7.
10
Binding Affinities among DNA Helicase-Primase, DNA Polymerase, and Replication Intermediates in the Replisome of Bacteriophage T7.噬菌体T7复制体中DNA解旋酶-引发酶、DNA聚合酶与复制中间体之间的结合亲和力
J Biol Chem. 2016 Jan 15;291(3):1472-80. doi: 10.1074/jbc.M115.698233. Epub 2015 Nov 30.