Bucardo Filemon, Karlsson Beatrice, Nordgren Johan, Paniagua Margarita, González Alcides, Amador Juan Jose, Espinoza Felix, Svensson Lennart
Department of Microbiology, National Autonomous University of Nicaragua, León, Nicaragua.
J Clin Microbiol. 2007 Mar;45(3):990-7. doi: 10.1128/JCM.01992-06. Epub 2007 Jan 17.
During February and March 2005, one of the largest national recorded outbreaks of severe acute gastroenteritis occurred in Nicaragua, affecting >or=64,000 individuals and causing >or=56 deaths, predominantly in children under 5 years of age. Through a nationwide laboratory-based study, stool samples were collected and investigated for rotavirus. Of 108 stool samples examined, 72 (67%) were positive for rotavirus. While 69% (50/72) of the positive samples were found in children less than 2 years of age, 50% (6/12) of the adult samples were positive. A mutated G4P[8] strain was the most commonly recognized strain (85%), followed by mixed G strains (8%) and G9P[8] (7%) strains. Phylogenetic analysis of the VP7 gene revealed that the G4 strains belonged to the emerging lineage Ic and was distantly related to the ST3 and VA70 G4 strains. Secondary structure predictions of the VP7 G4 protein revealed an insert of an asparagine residue in position 76, which, combined with additional mutations, surprisingly modified two downstream beta-sheets at amino acid positions 80 to 85 and 115 to 119. The 2005 G4P[8] strain compared to a G4P[8] strain from 2002 had a substitution of an asparagine residue for threonine (Asn-->Thr) at position 96 within antigenic region A, thus eliminating a potential glycosylation site. The mutated G4 virus was introduced in Nicaragua after 2002 and probably emerged from Brazil, Argentina, or Uruguay.
2005年2月至3月期间,尼加拉瓜发生了有记录以来该国最大规模的严重急性胃肠炎疫情之一,感染人数≥64000人,导致≥56人死亡,主要是5岁以下儿童。通过一项全国性的基于实验室的研究,收集了粪便样本并对轮状病毒进行检测。在检测的108份粪便样本中,72份(67%)轮状病毒呈阳性。虽然69%(50/72)的阳性样本来自2岁以下儿童,但50%(6/12)的成人样本也呈阳性。一种变异的G4P[8]毒株是最常见的毒株(85%),其次是混合G毒株(8%)和G9P[8]毒株(7%)。对VP7基因的系统发育分析表明,G4毒株属于新兴的Ic谱系,与ST3和VA70 G4毒株关系较远。VP7 G4蛋白的二级结构预测显示,在第76位插入了一个天冬酰胺残基,该残基与其他突变一起,出人意料地改变了下游第80至85位和115至119位氨基酸处的两个β折叠。与2002年的G4P[8]毒株相比,2005年的G4P[8]毒株在抗原区域A的第96位发生了苏氨酸被天冬酰胺取代(Asn→Thr)的情况,从而消除了一个潜在的糖基化位点。变异的G4病毒于2002年后传入尼加拉瓜,可能源自巴西、阿根廷或乌拉圭。