• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

完全的基因连锁会颠覆自然选择。

Complete genetic linkage can subvert natural selection.

作者信息

Gerrish Philip J, Colato Alexandre, Perelson Alan S, Sniegowski Paul D

机构信息

Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM 87501, USA.

出版信息

Proc Natl Acad Sci U S A. 2007 Apr 10;104(15):6266-71. doi: 10.1073/pnas.0607280104. Epub 2007 Apr 3.

DOI:10.1073/pnas.0607280104
PMID:17405865
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1851075/
Abstract

The intricate adjustment of organisms to their environment demonstrates the effectiveness of natural selection. But Darwin himself recognized that certain biological features could limit this effectiveness, features that generally reduce the efficiency of natural selection or yield suboptimal adaptation. Genetic linkage is known to be one such feature, and here we show theoretically that it can introduce a more sinister flaw: when there is complete linkage between loci affecting fitness and loci affecting mutation rate, positive natural selection and recurrent mutation can drive mutation rates in an adapting population to intolerable levels. We discuss potential implications of this finding for the early establishment of recombination, the evolutionary fate of asexual populations, and immunological clearance of clonal pathogens.

摘要

生物体对其环境的复杂调节体现了自然选择的有效性。但达尔文本人也认识到某些生物学特征可能会限制这种有效性,这些特征通常会降低自然选择的效率或导致适应性次优。基因连锁就是这样一种特征,在此我们从理论上表明它可能会引入一个更严重的缺陷:当影响适合度的基因座与影响突变率的基因座完全连锁时,正向自然选择和反复突变会使适应种群中的突变率升至无法容忍的水平。我们讨论了这一发现对于重组的早期建立、无性种群的进化命运以及克隆病原体的免疫清除的潜在影响。

相似文献

1
Complete genetic linkage can subvert natural selection.完全的基因连锁会颠覆自然选择。
Proc Natl Acad Sci U S A. 2007 Apr 10;104(15):6266-71. doi: 10.1073/pnas.0607280104. Epub 2007 Apr 3.
2
Nonequilibrium model for estimating parameters of deleterious mutations.用于估计有害突变参数的非平衡模型。
Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Mar;71(3 Pt 1):031907. doi: 10.1103/PhysRevE.71.031907. Epub 2005 Mar 18.
3
Genetic linkage and natural selection.遗传连锁与自然选择。
Philos Trans R Soc Lond B Biol Sci. 2010 Aug 27;365(1552):2559-69. doi: 10.1098/rstb.2010.0106.
4
The effect of bacterial recombination on adaptation on fitness landscapes with limited peak accessibility.细菌重组对适应有限峰值可达性适应景观的影响。
PLoS Comput Biol. 2012;8(10):e1002735. doi: 10.1371/journal.pcbi.1002735. Epub 2012 Oct 25.
5
Overdominance interacts with linkage to determine the rate of adaptation to a new optimum.超显性与连锁相互作用,以确定对新最优状态的适应速率。
J Evol Biol. 2015 Jan;28(1):95-104. doi: 10.1111/jeb.12547. Epub 2014 Dec 2.
6
The adaptation rate of asexuals: deleterious mutations, clonal interference and population bottlenecks.无性生殖的适应速度:有害突变、克隆干扰和种群瓶颈。
Evolution. 2010 Jul;64(7):1973-83. doi: 10.1111/j.1558-5646.2010.00981.x. Epub 2010 Feb 26.
7
Recombination Alters the Dynamics of Adaptation on Standing Variation in Laboratory Yeast Populations.重组改变了实验室酵母群体中站立变异适应性的动态。
Mol Biol Evol. 2018 Jan 1;35(1):180-201. doi: 10.1093/molbev/msx278.
8
Recombination accelerates adaptation on a large-scale empirical fitness landscape in HIV-1.重组加速了HIV-1在大规模经验性适应度景观上的适应性。
PLoS Genet. 2014 Jun 26;10(6):e1004439. doi: 10.1371/journal.pgen.1004439. eCollection 2014 Jun.
9
Coalescence and genetic diversity in sexual populations under selection.选择作用下有性生殖群体的合并与遗传多样性。
Proc Natl Acad Sci U S A. 2013 Sep 24;110(39):15836-41. doi: 10.1073/pnas.1309697110. Epub 2013 Sep 9.
10
Recombination can evolve in large finite populations given selection on sufficient loci.在足够数量的基因座上进行选择时,重组可以在大型有限群体中进化。
Genetics. 2003 Dec;165(4):2249-58. doi: 10.1093/genetics/165.4.2249.

引用本文的文献

1
Sex-specific viability effects of mutations in Drosophila melanogaster.果蝇中突变的性别特异性生存力效应。
Evolution. 2024 Oct 28;78(11):1844-1853. doi: 10.1093/evolut/qpae134.
2
Holistic understanding of trimethoprim resistance in using an integrative approach of genome-wide association study, resistance reconstruction, and machine learning.采用全基因组关联研究、耐药重建和机器学习的综合方法对 使用中的甲氧苄啶耐药进行整体理解。
mBio. 2024 Sep 11;15(9):e0136024. doi: 10.1128/mbio.01360-24. Epub 2024 Aug 9.
3
Population genetics of clonally transmissible cancers.克隆传播癌症的种群遗传学。
Nat Ecol Evol. 2022 Aug;6(8):1077-1089. doi: 10.1038/s41559-022-01790-3. Epub 2022 Jul 25.
4
Loss of heterozygosity results in rapid but variable genome homogenization across yeast genetic backgrounds.杂合性缺失导致酵母遗传背景下的基因组快速但可变的同质化。
Elife. 2021 Jun 23;10:e70339. doi: 10.7554/eLife.70339.
5
Leaf anatomy is not correlated to CAM function in a C3+CAM hybrid species, Yucca gloriosa.叶解剖结构与 C3+CAM 杂交种丝兰的 CAM 功能无关。
Ann Bot. 2021 Mar 24;127(4):437-449. doi: 10.1093/aob/mcaa036.
6
The Mutator Phenotype: Adapting Microbial Evolution to Cancer Biology.突变体表型:使微生物进化适应癌症生物学
Front Genet. 2019 Aug 6;10:713. doi: 10.3389/fgene.2019.00713. eCollection 2019.
7
Genomic clustering of fitness-affecting mutations favors the evolution of chromosomal instability.影响适应性的突变的基因组聚类有利于染色体不稳定性的进化。
Evol Appl. 2018 Oct 11;12(2):301-313. doi: 10.1111/eva.12717. eCollection 2019 Feb.
8
Complexities of Viral Mutation Rates.病毒突变率的复杂性。
J Virol. 2018 Jun 29;92(14). doi: 10.1128/JVI.01031-17. Print 2018 Jul 15.
9
Sign of selection on mutation rate modifiers depends on population size.选择对突变率修饰因子的影响取决于种群大小。
Proc Natl Acad Sci U S A. 2018 Mar 27;115(13):3422-3427. doi: 10.1073/pnas.1715996115. Epub 2018 Mar 12.
10
Beneficial mutation-selection dynamics in finite asexual populations: a free boundary approach.有限无性群体中有利突变-选择动力学:自由边界方法。
Sci Rep. 2017 Dec 19;7(1):17838. doi: 10.1038/s41598-017-17212-5.

本文引用的文献

1
MUTATION LOAD AND THE SURVIVAL OF SMALL POPULATIONS.突变负荷与小种群的生存
Evolution. 1990 Nov;44(7):1725-1737. doi: 10.1111/j.1558-5646.1990.tb05244.x.
2
PERSPECTIVE: SPONTANEOUS DELETERIOUS MUTATION.观点:自发有害突变
Evolution. 1999 Jun;53(3):645-663. doi: 10.1111/j.1558-5646.1999.tb05361.x.
3
Error-threshold exists in fitness landscapes with lethal mutants.在具有致死性突变体的适应度景观中存在错误阈值。
BMC Evol Biol. 2007 Feb 7;7:15; author reply 15. doi: 10.1186/1471-2148-7-15.
4
An equivalence principle for the incorporation of favorable mutations in asexual populations.无性群体中有利突变整合的等效原理。
Science. 2006 Mar 17;311(5767):1615-7. doi: 10.1126/science.1122469.
5
Quasispecies made simple.准种简化版。
PLoS Comput Biol. 2005 Nov;1(6):e61. doi: 10.1371/journal.pcbi.0010061.
6
The evolution of mutation rate in finite asexual populations.有限无性种群中突变率的演变。
Genetics. 2006 Jan;172(1):611-26. doi: 10.1534/genetics.105.046680. Epub 2005 Sep 12.
7
Quasispecies theory in the context of population genetics.群体遗传学背景下的准种理论。
BMC Evol Biol. 2005 Aug 17;5:44. doi: 10.1186/1471-2148-5-44.
8
Incorporation fidelity of the viral RNA-dependent RNA polymerase: a kinetic, thermodynamic and structural perspective.病毒RNA依赖性RNA聚合酶的掺入保真度:动力学、热力学和结构视角
Virus Res. 2005 Feb;107(2):141-9. doi: 10.1016/j.virusres.2004.11.004.
9
Thermodynamic prediction of protein neutrality.蛋白质中性的热力学预测。
Proc Natl Acad Sci U S A. 2005 Jan 18;102(3):606-11. doi: 10.1073/pnas.0406744102. Epub 2005 Jan 11.
10
Adaptive evolution of asexual populations under Muller's ratchet.在穆勒棘轮作用下无性繁殖种群的适应性进化。
Evolution. 2004 Jul;58(7):1403-13. doi: 10.1111/j.0014-3820.2004.tb01722.x.