Laboratoire de Génétique Humaine des Maladies Infectieuses, INSERM, U550, Paris, France.
PLoS One. 2007 May 2;2(5):e406. doi: 10.1371/journal.pone.0000406.
Epstein-Barr virus (EBV) is the major environmental factor associated with Hodgkin's lymphoma (HL), a common lymphoma in young adults. Natural killer (NK) cells are key actors of the innate immune response against viruses. The regulation of NK cell function involves activating and inhibitory Killer cell Immunoglobulin-like receptors (KIRs), which are expressed in variable numbers on NK cells. Various viral and virus-related malignant disorders have been associated with the presence/absence of certain KIR genes in case/control studies. We investigated the role of the KIR cluster in HL in a family-based association study.
We included 90 families with 90 HL index cases (age 16-35 years) and 255 first-degree relatives (parents and siblings). We developed a procedure for reconstructing full genotypic information (number of gene copies) at each KIR locus from the standard KIR gene content. Out of the 90 collected families, 84 were informative and suitable for further analysis. An association study was then carried out with specific family-based analysis methods on these 84 families.
Five KIR genes in strong linkage disequilibrium were found significantly associated with HL. Refined haplotype analysis showed that the association was supported by a dominant protective effect of KIR3DS1 and/or KIR2DS1, both of which are activating receptors. The odds ratios for developing HL in subjects with at least one copy of KIR3DS1 or KIR2DS1 with respect to subjects with neither of these genes were 0.44[95% confidence interval 0.23-0.85] and 0.42[0.21-0.85], respectively. No significant association was found in a tentative replication case/control study of 68 HL cases (age 18-71 years). In the familial study, the protective effect of KIR3DS1/KIR2DS1 tended to be stronger in HL patients with detectable EBV in blood or tumour cells.
This work defines a template for family-based association studies based on full genotypic information for the KIR cluster, and provides the first evidence that activating KIRs can have a protective role in HL.
爱泼斯坦-巴尔病毒(EBV)是与霍奇金淋巴瘤(HL)相关的主要环境因素,HL 是一种常见于年轻人的淋巴瘤。自然杀伤(NK)细胞是针对病毒的固有免疫反应的关键因素。NK 细胞功能的调节涉及激活和抑制杀伤细胞免疫球蛋白样受体(KIR),这些受体在 NK 细胞上以不同数量表达。在病例对照研究中,各种病毒和与病毒相关的恶性疾病与某些 KIR 基因的存在/缺失有关。我们在基于家族的关联研究中研究了 KIR 簇在 HL 中的作用。
我们纳入了 90 个家庭,其中包括 90 个 HL 索引病例(年龄 16-35 岁)和 255 个一级亲属(父母和兄弟姐妹)。我们开发了一种从标准 KIR 基因含量重建每个 KIR 基因座的完整基因型信息(基因拷贝数)的程序。在收集的 90 个家庭中,有 84 个家庭是信息丰富且适合进一步分析的。然后,我们对这 84 个家庭进行了特定的基于家族的关联研究。
在强连锁不平衡的 5 个 KIR 基因中,发现它们与 HL 显著相关。精细单倍型分析表明,这种关联受到 KIR3DS1 和/或 KIR2DS1 的显性保护作用的支持,这两种受体都是激活受体。在至少有一个 KIR3DS1 或 KIR2DS1 拷贝的个体中,与既没有这些基因的个体相比,HL 的发病风险比为 0.44[95%置信区间 0.23-0.85]和 0.42[0.21-0.85]。在 68 例 HL 病例(年龄 18-71 岁)的初步复制病例对照研究中未发现显著关联。在家族研究中,在血液或肿瘤细胞中可检测到 EBV 的 HL 患者中,KIR3DS1/KIR2DS1 的保护作用倾向于更强。
这项工作定义了基于 KIR 簇的完整基因型信息的基于家族的关联研究模板,并首次提供了激活的 KIR 可以在 HL 中发挥保护作用的证据。