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GeneVenn - 一个使用维恩图比较基因列表的网络应用程序。

GeneVenn - A web application for comparing gene lists using Venn diagrams.

作者信息

Pirooznia Mehdi, Nagarajan Vijayaraj, Deng Youping

机构信息

Department of Biological Sciences, University of Southern Mississippi, Hattiesburg, Mississippi 39406, USA.

出版信息

Bioinformation. 2007 Apr 10;1(10):420-2. doi: 10.6026/97320630001420.


DOI:10.6026/97320630001420
PMID:17597932
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1899164/
Abstract

UNLABELLED: Numerous methods are available to compare results of multiple microarray studies. One of the simplest but most effective of these procedures is to examine the overlap of resulting gene lists in a Venn diagram. Venn diagrams are graphical ways of representing interactions among sets to display information that can be read easily. Here we propose a simple but effective web application creating Venn diagrams from two or three gene lists. Each gene in the group list has link to the related information in NCBI's Entrez Nucleotide database. AVAILABILITY: GeneVenn is available for free at http://mcbc.usm.edu/genevenn/

摘要

未标注:有多种方法可用于比较多个微阵列研究的结果。其中最简单但最有效的方法之一是在维恩图中检查所得基因列表的重叠情况。维恩图是以图形方式表示集合间的相互作用,以展示易于读取的信息。在此,我们提出一个简单而有效的网络应用程序,可根据两个或三个基因列表创建维恩图。分组列表中的每个基因都链接到NCBI的Entrez核苷酸数据库中的相关信息。 可用性:GeneVenn可在http://mcbc.usm.edu/genevenn/免费获取。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2cbc/1899164/74dd508188ec/97320630001420F2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2cbc/1899164/be04c812d24f/97320630001420F1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2cbc/1899164/74dd508188ec/97320630001420F2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2cbc/1899164/be04c812d24f/97320630001420F1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2cbc/1899164/74dd508188ec/97320630001420F2.jpg

相似文献

[1]
GeneVenn - A web application for comparing gene lists using Venn diagrams.

Bioinformation. 2007-4-10

[2]
BioVenn - a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams.

BMC Genomics. 2008-10-16

[3]
jvenn: an interactive Venn diagram viewer.

BMC Bioinformatics. 2014-8-29

[4]
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Brief Bioinform. 2021-9-2

[5]
DynaVenn: web-based computation of the most significant overlap between ordered sets.

BMC Bioinformatics. 2019-12-30

[6]
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BMC Bioinformatics. 2019-12-27

[7]
NetSets.js: a JavaScript framework for compositional assessment and comparison of biological networks through Venn-integrated network diagrams.

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[8]
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Bioinformatics. 2018-7-1

[9]
VennPainter: A Tool for the Comparison and Identification of Candidate Genes Based on Venn Diagrams.

PLoS One. 2016-4-27

[10]
VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R.

BMC Bioinformatics. 2011-1-26

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