• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

果蝇基因组计划:酵母人工染色体中的单倍体覆盖

Drosophila genome project: one-hit coverage in yeast artificial chromosomes.

作者信息

Ajioka J W, Smoller D A, Jones R W, Carulli J P, Vellek A E, Garza D, Link A J, Duncan I W, Hartl D L

机构信息

Department of Genetics, Washington University School of Medicine, St. Louis, MO 63110-1095.

出版信息

Chromosoma. 1991 Sep;100(8):495-509. doi: 10.1007/BF00352200.

DOI:10.1007/BF00352200
PMID:1764968
Abstract

We present a strategy for assembling a physical map of the genome of Drosophila melanogaster based on yeast artificial chromosomes (YACs). In this paper we report 500 YACs containing inserts of Drosophila DNA averaging 200 kb that have been assigned positions on the physical map by means of in situ hybridization with salivary gland chromosomes. The cloned DNA fragments have randomly sheared ends (DY clones) or ends generated by partial digestion with either NotI (N clones) or EcoRI (E clones). Relative to the euchromatic portion of the genome, the size distribution and genomic positions of the clones reveal no significant bias in the completeness or randomness of genome coverage. The 500 mapped euchromatic clones contain an aggregate of approximately 100 million base pairs of DNA, which is approximately one genome equivalent of Drosophila euchromatin.

摘要

我们提出了一种基于酵母人工染色体(YAC)构建黑腹果蝇基因组物理图谱的策略。在本文中,我们报告了500个含有平均长度为200 kb的果蝇DNA插入片段的YAC,这些YAC已通过与唾液腺染色体的原位杂交被定位到物理图谱上。克隆的DNA片段具有随机剪切的末端(DY克隆)或由NotI(N克隆)或EcoRI(E克隆)部分消化产生的末端。相对于基因组的常染色质部分,克隆的大小分布和基因组位置显示在基因组覆盖的完整性或随机性方面没有明显偏差。500个定位的常染色质克隆包含总计约1亿个碱基对的DNA,这大约相当于果蝇常染色质的一个基因组当量。

相似文献

1
Drosophila genome project: one-hit coverage in yeast artificial chromosomes.果蝇基因组计划:酵母人工染色体中的单倍体覆盖
Chromosoma. 1991 Sep;100(8):495-509. doi: 10.1007/BF00352200.
2
[Cloning of segments of the Drosophila melanogaster genome using artificial chromosomes of the yeast Saccharomyces cerevisiae].[利用酿酒酵母人工染色体克隆黑腹果蝇基因组片段]
Genetika. 1991 Aug;27(8):1316-23.
3
A combined molecular and cytogenetic approach to genome evolution in Drosophila using large-fragment DNA cloning.一种利用大片段DNA克隆对果蝇基因组进化进行分子与细胞遗传学相结合的研究方法。
Chromosoma. 1993 Mar;102(4):253-66. doi: 10.1007/BF00352399.
4
Characterization of bacteriophage P1 library containing inserts of Drosophila DNA of 75-100 kilobase pairs.含有75 - 100千碱基对果蝇DNA插入片段的噬菌体P1文库的特性分析。
Chromosoma. 1991 Sep;100(8):487-94. doi: 10.1007/BF00352199.
5
Towards a Drosophila genome map.迈向果蝇基因组图谱。
Trends Genet. 1992 Feb;8(2):70-5. doi: 10.1016/0168-9525(92)90353-6.
6
Mapping the Drosophila genome with yeast artificial chromosomes.利用酵母人工染色体绘制果蝇基因组图谱。
Science. 1989 Nov 3;246(4930):641-6. doi: 10.1126/science.2510296.
7
Physical mapping of the Myxococcus xanthus genome by random cloning in yeast artificial chromosomes.通过在酵母人工染色体中随机克隆对黄色粘球菌基因组进行物理图谱绘制。
Proc Natl Acad Sci U S A. 1989 Nov;86(22):8917-21. doi: 10.1073/pnas.86.22.8917.
8
A P1-based physical map of the Drosophila euchromatic genome.基于P1的果蝇常染色体基因组物理图谱。
Genome Res. 1996 May;6(5):414-30. doi: 10.1101/gr.6.5.414.
9
Yeast artificial chromosomes: tools for mapping and analysis of complex genomes.酵母人工染色体:用于复杂基因组图谱绘制与分析的工具。
Trends Genet. 1990 Aug;6(8):248, 255-8. doi: 10.1016/0168-9525(90)90207-m.
10
Genome structure and evolution in Drosophila: applications of the framework P1 map.果蝇的基因组结构与进化:框架P1图谱的应用
Proc Natl Acad Sci U S A. 1994 Jul 19;91(15):6824-9. doi: 10.1073/pnas.91.15.6824.

引用本文的文献

1
Combining Fusion of Cells with CRISPR-Cas9 Editing for the Cloning of Large DNA Fragments or Complete Bacterial Genomes in Yeast.将细胞融合与 CRISPR-Cas9 编辑相结合,用于在酵母中克隆大片段 DNA 或完整的细菌基因组。
ACS Synth Biol. 2023 Nov 17;12(11):3252-3266. doi: 10.1021/acssynbio.3c00248. Epub 2023 Oct 16.
2
From first base: the sequence of the tip of the X chromosome of Drosophila melanogaster, a comparison of two sequencing strategies.从第一个碱基开始:黑腹果蝇X染色体末端的序列,两种测序策略的比较。
Genome Res. 2001 May;11(5):710-30. doi: 10.1101/gr.173801.
3
Structure and regulation of the salivary gland secretion protein gene Sgs-1 of Drosophila melanogaster.

本文引用的文献

1
A NEW METHOD FOR THE STUDY OF CHROMOSOME REARRANGEMENTS AND THE PLOTTING OF CHROMOSOME MAPS.一种研究染色体重排及绘制染色体图谱的新方法。
Science. 1933 Dec 22;78(2034):585-6. doi: 10.1126/science.78.2034.585.
2
Toward a physical map of the genome of the nematode Caenorhabditis elegans.构建秀丽隐杆线虫基因组物理图谱。
Proc Natl Acad Sci U S A. 1986 Oct;83(20):7821-5. doi: 10.1073/pnas.83.20.7821.
3
A transposable P vector that confers selectable G418 resistance to Drosophila larvae.一个可转座的 P 载体,赋予果蝇幼虫可选择的 G418 抗性。
黑腹果蝇唾液腺分泌蛋白基因Sgs-1的结构与调控
Genetics. 1999 Oct;153(2):753-62. doi: 10.1093/genetics/153.2.753.
4
The optx2 homeobox gene is expressed in early precursors of the eye and activates retina-specific genes.optx2 同源框基因在眼睛的早期前体细胞中表达,并激活视网膜特异性基因。
Proc Natl Acad Sci U S A. 1998 Sep 1;95(18):10643-8. doi: 10.1073/pnas.95.18.10643.
5
Chromosomal homology and molecular organization of Muller's elements D and E in the Drosophila repleta species group.果蝇(Drosophila repleta)物种群中穆勒氏元件D和E的染色体同源性及分子组织
Genetics. 1997 Feb;145(2):281-95. doi: 10.1093/genetics/145.2.281.
6
Drosophila Myc is oncogenic in mammalian cells and plays a role in the diminutive phenotype.果蝇Myc在哺乳动物细胞中具有致癌性,并在矮小表型中发挥作用。
Proc Natl Acad Sci U S A. 1997 Feb 18;94(4):1235-40. doi: 10.1073/pnas.94.4.1235.
7
RIC, a calmodulin-binding Ras-like GTPase.RIC,一种钙调蛋白结合的类Ras GTP酶。
EMBO J. 1996 Nov 1;15(21):5839-48.
8
P1 clones from Drosophila melanogaster as markers to study the chromosomal evolution of Muller's A element in two species of the obscura group of Drosophila.来自黑腹果蝇的P1克隆作为标记,用于研究果蝇暗果蝇组两个物种中穆勒A元素的染色体进化。
Chromosoma. 1995 Nov;104(2):129-36. doi: 10.1007/BF00347695.
9
Biological insights through genomics: mouse to man.通过基因组学获得的生物学见解:从小鼠到人类
J Clin Invest. 1996 Jan 15;97(2):275-80. doi: 10.1172/JCI118413.
10
A combined molecular and cytogenetic approach to genome evolution in Drosophila using large-fragment DNA cloning.一种利用大片段DNA克隆对果蝇基因组进化进行分子与细胞遗传学相结合的研究方法。
Chromosoma. 1993 Mar;102(4):253-66. doi: 10.1007/BF00352399.
EMBO J. 1985 Jan;4(1):167-71. doi: 10.1002/j.1460-2075.1985.tb02332.x.
4
Immunological method for mapping genes on Drosophila polytene chromosomes.在果蝇多线染色体上绘制基因图谱的免疫学方法。
Proc Natl Acad Sci U S A. 1982 Jul;79(14):4381-5. doi: 10.1073/pnas.79.14.4381.
5
The molecular organization of the Antennapedia locus of Drosophila.果蝇触角足基因座的分子组织
Cell. 1983 Dec;35(3 Pt 2):763-76. doi: 10.1016/0092-8674(83)90109-5.
6
Chromosomal walking and jumping to isolate DNA from the Ace and rosy loci and the bithorax complex in Drosophila melanogaster.通过染色体步移和跳查从黑腹果蝇的Ace和玫瑰色基因座以及双胸复合体中分离DNA。
J Mol Biol. 1983 Jul 25;168(1):17-33. doi: 10.1016/s0022-2836(83)80320-9.
7
Separation of chromosomal DNA molecules from yeast by orthogonal-field-alternation gel electrophoresis.通过正交交变电场凝胶电泳从酵母中分离染色体DNA分子。
Nucleic Acids Res. 1984 Jul 25;12(14):5647-64. doi: 10.1093/nar/12.14.5647.
8
"A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum.一种将DNA限制性内切酶片段放射性标记至高比活度的技术。附录
Anal Biochem. 1984 Feb;137(1):266-7. doi: 10.1016/0003-2697(84)90381-6.
9
The molecular basis of P-M hybrid dysgenesis: the role of the P element, a P-strain-specific transposon family.P-M杂种不育的分子基础:P因子(一种P品系特异性转座子家族)的作用。
Cell. 1982 Jul;29(3):995-1004. doi: 10.1016/0092-8674(82)90463-9.
10
Genetic transformation of Drosophila with transposable element vectors.利用转座元件载体对果蝇进行遗传转化。
Science. 1982 Oct 22;218(4570):348-53. doi: 10.1126/science.6289436.