Metagenomics: a call for bringing a new science into the classroom (while it's still new).
作者信息
Jurkowski Anne, Reid Ann H, Labov Jay B
机构信息
Division on Earth and Life Studies, Center for Education, National Research Council, Washington, DC 20001, USA.
出版信息
CBE Life Sci Educ. 2007 Winter;6(4):260-5. doi: 10.1187/cbe.07-09-0075.
Abstract
摘要
相似文献
1
Metagenomics: a call for bringing a new science into the classroom (while it's still new).
CBE Life Sci Educ. 2007 Winter;6(4):260-5. doi: 10.1187/cbe.07-09-0075.
2
What's the 'meta' with metagenomics?
ISME J. 2007 Jun;1(2):100-2. doi: 10.1038/ismej.2007.25. Epub 2007 May 17.
3
Ecosystem function decays by fungal outbreaks in Antarctic microbial mats.
Sci Rep. 2016 Mar 14;6:22954. doi: 10.1038/srep22954.
4
Living in Their World.
Cell. 2018 Mar 8;172(6):1137-1138. doi: 10.1016/j.cell.2018.02.056.
5
Microbiology: metagenomics.
Nature. 2008 Sep 25;455(7212):481-3. doi: 10.1038/455481a.
6
Culture clash: challenging the dogma of microbial diversity.
ISME J. 2007 Jun;1(2):97-9. doi: 10.1038/ismej.2007.22. Epub 2007 May 10.
7
New directions and interactions in metagenomics research.
FEMS Microbiol Ecol. 2006 Mar;55(3):331-8. doi: 10.1111/j.1574-6941.2005.00055.x.
8
Environmental viruses from biodiversity to ecology.
Curr Opin Virol. 2011 Jul;1(1):50-1. doi: 10.1016/j.coviro.2011.05.012. Epub 2011 Jun 11.
9
Exciting strain-level resolution studies of the food microbiome.
Microb Biotechnol. 2017 Jan;10(1):54-56. doi: 10.1111/1751-7915.12593. Epub 2017 Jan 3.
10
Airway microbial metagenomics.
Microbes Infect. 2018 Oct-Nov;20(9-10):536-542. doi: 10.1016/j.micinf.2017.12.002. Epub 2017 Dec 26.
引用本文的文献
1
A non-hypothesis-driven practical laboratory activity on functional metagenomics: "fishing" protein-coding DNA sequences from microbiomes.
Front Bioeng Biotechnol. 2025 May 20;13:1602982. doi: 10.3389/fbioe.2025.1602982. eCollection 2025.
2
Students in a Course-Based Undergraduate Research Experience Course Discovered Dramatic Changes in the Bacterial Community Composition Between Summer and Winter Lake Samples.
Front Microbiol. 2021 Feb 18;12:579325. doi: 10.3389/fmicb.2021.579325. eCollection 2021.
3
Microbiomes for All.
Front Microbiol. 2020 Nov 12;11:593472. doi: 10.3389/fmicb.2020.593472. eCollection 2020.
4
A Microbial Sampling and Community Reconstruction Activity for Introducing Students to the Burgeoning Field of Metagenomics.
J Microbiol Biol Educ. 2020 Apr 30;21(1). doi: 10.1128/jmbe.v21i1.1891. eCollection 2020.
5
Improving the Design of Undergraduate Biology Courses toward the Goal of Retention: The Case of Real-World Inquiry and Active Learning through Metagenomics.
J Microbiol Biol Educ. 2020 Apr 10;21(1). doi: 10.1128/jmbe.v21i1.1965. eCollection 2020.
6
Reliable Biomarker discovery from Metagenomic data via RegLRSD algorithm.
BMC Bioinformatics. 2017 Jul 10;18(1):328. doi: 10.1186/s12859-017-1738-1.
7
Bioinformatic Approaches Including Predictive Metagenomic Profiling Reveal Characteristics of Bacterial Response to Petroleum Hydrocarbon Contamination in Diverse Environments.
Sci Rep. 2017 Apr 24;7(1):1108. doi: 10.1038/s41598-017-01126-3.
8
Consistent metagenomic biomarker detection via robust PCA.
Biol Direct. 2017 Jan 31;12(1):4. doi: 10.1186/s13062-017-0175-4.
9
MetaBoot: a machine learning framework of taxonomical biomarker discovery for different microbial communities based on metagenomic data.
PeerJ. 2015 Jul 7;3:e993. doi: 10.7717/peerj.993. eCollection 2015.
10
Metagenomics: A new horizon in cancer research.
Meta Gene. 2015 Jun 14;5:84-9. doi: 10.1016/j.mgene.2015.05.005. eCollection 2015 Sep.
本文引用的文献
1
The pipeline. Scientific teaching in practice.
Science. 2008 Nov 28;322(5906):1329-30. doi: 10.1126/science.1166032.
2
Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes.
Science. 2007 Sep 21;317(5845):1753-6. doi: 10.1126/science.1142490. Epub 2007 Aug 30.
3
Genome Consortium for Active Teaching: meeting the goals of BIO2010.
CBE Life Sci Educ. 2007 Summer;6(2):109-18. doi: 10.1187/cbe.06-10-0196.
4
Metagenomics. Ocean study yields a tidal wave of microbial DNA.
Science. 2007 Mar 16;315(5818):1486-7. doi: 10.1126/science.315.5818.1486.
5
Exploring the mycobacteriophage metaproteome: phage genomics as an educational platform.
PLoS Genet. 2006 Jun;2(6):e92. doi: 10.1371/journal.pgen.0020092. Epub 2006 Jun 9.
6
Metagenomic analysis of the human distal gut microbiome.
Science. 2006 Jun 2;312(5778):1355-9. doi: 10.1126/science.1124234.
7
Comparison of dot chromosome sequences from D. melanogaster and D. virilis reveals an enrichment of DNA transposon sequences in heterochromatic domains.
Genome Biol. 2006;7(2):R15. doi: 10.1186/gb-2006-7-2-r15. Epub 2006 Feb 20.
8
Collaborative programs. Genome Consortium for Active Teaching (GCAT).
Science. 2006 Feb 24;311(5764):1103-4. doi: 10.1126/science.1121955.
9
From the National Academies: the challenges and opportunities for improving undergraduate science education through introductory courses.
Cell Biol Educ. 2004 Winter;3(4):212-4. doi: 10.1187/cbe.04-07-0049.
10
Education. Scientific teaching.
Science. 2004 Apr 23;304(5670):521-2. doi: 10.1126/science.1096022.
Zotero 插件