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铁血红素蛋白低频区域振动相干性的研究。

Investigations of vibrational coherence in the low-frequency region of ferric heme proteins.

作者信息

Gruia Flaviu, Kubo Minoru, Ye Xiong, Champion Paul M

机构信息

Department of Physics and Center for Interdisciplinary Research on Complex Systems, Northeastern University, Boston, Massachusetts, USA.

出版信息

Biophys J. 2008 Mar 15;94(6):2252-68. doi: 10.1529/biophysj.107.122119. Epub 2007 Dec 7.

Abstract

Femtosecond coherence spectroscopy is applied to a series of ferric heme protein samples. The low-frequency vibrational spectra that are revealed show dominant oscillations near 40 cm(-1). MbCN is taken as a typical example of a histidine-ligated, six-coordinate, ferric heme and a comprehensive spectroscopic analysis is carried out. The results of this analysis reveal a new heme photoproduct species, absorbing near 418 nm, which is consistent with the photolysis of the His(93) axial ligand. The photoproduct undergoes subsequent rebinding/recovery with a time constant of approximately 4 ps. The photoproduct lineshapes are consistent with a photolysis quantum yield of 75-100%, although the observation of a relatively strong six-coordinate heme coherence near 252 cm(-1) (assigned to nu(9) in the MbCN Raman spectrum) suggests that the 75% lower limit is much more likely. The phase and amplitude excitation profiles of the low-frequency mode at 40 cm(-1) suggest that this mode is strongly coupled to the MbCN photoproduct species and it is assigned to the doming mode of the transient penta-coordinated material. The absolute phase of the 40 cm(-1) mode is found to be pi/2 on the red side of 418 nm and it jumps to 3pi/2 as excitation is tuned to the blue side of 418 nm. The absolute phase of the 40 cm(-1) signal is not explained by the standard theory for resonant impulsive stimulated Raman scattering. New mechanisms that give a dominant momentum impulse to the resonant wavepacket, rather than a coordinate displacement, are discussed. The possibilities of heme iron atom recoil after photolysis, as well as ultrafast nonradiative decay, are explored as potential ways to generate the strong momentum impulse needed to understand the phase properties of the 40 cm(-1) mode.

摘要

飞秒相干光谱学被应用于一系列铁血红素蛋白样品。所揭示的低频振动光谱显示在40厘米⁻¹附近有主导振荡。MbCN被视为组氨酸配位的六配位铁血红素的典型例子,并进行了全面的光谱分析。该分析结果揭示了一种新的血红素光产物物种,在418纳米附近有吸收,这与His(93)轴向配体的光解一致。光产物随后以约4皮秒的时间常数进行重新结合/恢复。光产物的线形与75 - 100%的光解量子产率一致,尽管在252厘米⁻¹附近观察到相对较强的六配位血红素相干(在MbCN拉曼光谱中归属于ν(9))表明75%的下限更有可能。40厘米⁻¹处低频模式的相位和幅度激发轮廓表明该模式与MbCN光产物物种强烈耦合,并被归属于瞬态五配位物质的穹顶模式。发现40厘米⁻¹模式在418纳米红侧的绝对相位为π/2,当激发调谐到418纳米蓝侧时跃升至3π/2。40厘米⁻¹信号的绝对相位无法用共振脉冲受激拉曼散射的标准理论来解释。讨论了能给共振波包提供主导动量冲量而非坐标位移的新机制。探索了光解后血红素铁原子反冲以及超快非辐射衰变作为产生理解40厘米⁻¹模式相位特性所需的强大动量冲量的潜在方式。

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