Cytoscape ESP：复杂生物网络的简单搜索
Cytoscape ESP: simple search of complex biological networks.
作者信息
Ashkenazi Maital, Bader Gary D, Kuchinsky Allan, Moshelion Menachem, States David J
机构信息
Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University of Jerusalem, Rehovot, Israel.
出版信息
Bioinformatics. 2008 Jun 15;24(12):1465-6. doi: 10.1093/bioinformatics/btn208. Epub 2008 Apr 28.
SUMMARY
Cytoscape enhanced search plugin (ESP) enables searching complex biological networks on multiple attribute fields using logical operators and wildcards. Queries use an intuitive syntax and simple search line interface. ESP is implemented as a Cytoscape plugin and complements existing search functions in the Cytoscape network visualization and analysis software, allowing users to easily identify nodes, edges and subgraphs of interest, even for very large networks. Availabiity: http://chianti.ucsd.edu/cyto_web/plugins/
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摘要
Cytoscape增强搜索插件（ESP）可使用逻辑运算符和通配符在多个属性字段上搜索复杂的生物网络。查询使用直观的语法和简单的搜索行界面。ESP作为Cytoscape插件实现，对Cytoscape网络可视化和分析软件中的现有搜索功能起到补充作用，即使对于非常大的网络，也能让用户轻松识别感兴趣的节点、边和子图。可用性：http://chianti.ucsd.edu/cyto_web/plugins/
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