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通过电子顺磁共振波谱法测定半乳糖氧化酶中 Cys-Tyr(*) 自由基的电子结构。

The electronic structure of the Cys-Tyr(*) free radical in galactose oxidase determined by EPR spectroscopy.

机构信息

Department of Environmental and Biomolecular Systems, OGI School of Science and Engineering, Oregon Health and Science University, 20000 Northwest Walker Road, Beaverton, Oregon 97006-8921, USA.

出版信息

Biochemistry. 2008 Jun 24;47(25):6637-49. doi: 10.1021/bi800305d.

Abstract

Galactose oxidase is a metalloenzyme containing a novel metalloradical complex in its active site, comprised of a mononuclear copper ion associated with a protein free radical. The free radical has been shown to be localized on an intrinsic redox cofactor, 3'-(S-cysteinyl)tyrosine (Cys-Tyr), formed by a posttranslational covalent coupling of tyrosine and cysteine side chains in a self-processing reaction. The role of the thioether linkage in the function of the Cys-Tyr cofactor is unresolved, and some computational studies have suggested that the thioether substituent has a negligible effect on the properties of the tyrosyl free radical. In order to address this question experimentally, we have incorporated site-selectively labeled tyrosine ((2)H, (13)C, (17)O) into galactose oxidase using an engineered tyrosine auxotroph strain of Pichia pastoris . (33)S was also incorporated into the protein. EPR spectra for the Cys-Tyr() free radical in each of these isotopic variants were analyzed to extract nuclear hyperfine parameters for comparison with theoretical predictions, and the unpaired spin distribution in the free radical was reconstructed from the hyperfine data. These labeling studies allow the first comprehensive experimental evaluation of the effect of the thioether linkage on the properties of Cys-Tyr() and indicate that previous calculations significantly underestimated the contribution of this feature to the electronic ground state of the free radical.

摘要

半乳糖氧化酶是一种金属酶,其活性位点含有一种新型的金属自由基复合物,由与蛋白质自由基相关的单核铜离子组成。该自由基已被证明定位于内在氧化还原辅因子 3'-(S-半胱氨酸)酪氨酸(Cys-Tyr)上,该辅因子通过酪氨酸和半胱氨酸侧链在自加工反应中的翻译后共价偶联形成。硫醚键在 Cys-Tyr 辅因子功能中的作用尚未解决,一些计算研究表明,硫醚取代基对酪氨酸自由基的性质几乎没有影响。为了从实验上解决这个问题,我们使用毕赤酵母的工程化酪氨酸营养缺陷型菌株,将定点标记的酪氨酸((2)H、(13)C、(17)O)掺入半乳糖氧化酶中。(33)S 也被掺入到蛋白质中。对这些同位素变体中每个 Cys-Tyr()自由基的 EPR 光谱进行了分析,以提取核超精细参数进行比较理论预测,并从超精细数据重建自由基中的未配对自旋分布。这些标记研究允许对硫醚键对半胱氨酸酪氨酸()性质的影响进行首次全面的实验评估,并表明先前的计算显著低估了该特征对自由基电子基态的贡献。

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