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将解蛋白梭菌重新分类为解蛋白丁酸弧菌,新组合,一种产丁酸的瘤胃细菌。

Reclassification of Clostridium proteoclasticum as Butyrivibrio proteoclasticus comb. nov., a butyrate-producing ruminal bacterium.

作者信息

Moon Christina D, Pacheco Diana M, Kelly William J, Leahy Sinead C, Li Dong, Kopecny Jan, Attwood Graeme T

机构信息

Food, Metabolism and Microbiology Section, AgResearch Ltd, Grasslands Research Centre, Tennent Drive, Private Bag 11008, Palmerston North, New Zealand.

出版信息

Int J Syst Evol Microbiol. 2008 Sep;58(Pt 9):2041-5. doi: 10.1099/ijs.0.65845-0.

Abstract

It is proposed that Clostridium proteoclasticum be reclassified as Butyrivibrio proteoclasticus comb. nov. on the basis of phylogenetic position, DNA G+C content and physiological traits. Phylogenetic analyses based on 16S rRNA gene sequences from an extensive range of taxa within clostridial rRNA subcluster XIVa grouped C. proteoclasticum together with isolates of the genus Butyrivibrio, though this species was genetically distinct from the extant Butyrivibrio species examined. The DNA G+C content of C. proteoclasticum was originally erroneously reported as 28 mol%. However the genome sequence of the type strain of C. proteoclasticum, strain B316(T), and HPLC analysis estimate the DNA G+C content as 40 mol%, which is within the range reported for strains of Butyrivibrio. C. proteoclasticum was distinguishable from other species of the genus Butyrivibrio as the 16S rRNA gene from strain B316(T) shared less than 97 % sequence similarity with sequences from the type strains of Butyrivibrio species. C. proteoclasticum was also able to convert linoleic acid to stearic acid, in contrast to other species of Butyrivibrio. Physiological characteristics, including carbon source utilization, volatile fatty acid production and proteinase activities, were assessed for a panel of representative strains of the genera Butyrivibrio and Pseudobutyrivibrio and C. proteoclasticum. These data, together with the phylogenetic analyses, support the reclassification of Clostridium proteoclasticum as a separate species within the genus Butyrivibrio, Butyrivibrio proteoclasticus comb. nov. (type strain B316(T)=ATCC 51982(T)=DSM 14932(T)).

摘要

基于系统发育位置、DNA G+C含量和生理特征,提议将解蛋白梭菌重新分类为解蛋白丁酸弧菌(Butyrivibrio proteoclasticus)新组合。基于梭菌rRNA亚群XIVa内广泛分类单元的16S rRNA基因序列进行的系统发育分析,将解蛋白梭菌与丁酸弧菌属的分离株归为一类,尽管该物种在遗传上与所检测的现存丁酸弧菌物种不同。解蛋白梭菌的DNA G+C含量最初被错误报道为28 mol%。然而,解蛋白梭菌模式菌株B316(T)的基因组序列和高效液相色谱分析估计其DNA G+C含量为40 mol%,这在丁酸弧菌属菌株报道的范围内。解蛋白梭菌与丁酸弧菌属的其他物种不同,因为来自菌株B316(T)的16S rRNA基因与丁酸弧菌物种模式菌株的序列相似性低于97%。与其他丁酸弧菌物种相比,解蛋白梭菌还能够将亚油酸转化为硬脂酸。对丁酸弧菌属、假丁酸弧菌属的一组代表性菌株和解蛋白梭菌的生理特征进行了评估,包括碳源利用、挥发性脂肪酸产生和蛋白酶活性。这些数据,连同系统发育分析,支持将解蛋白梭菌重新分类为丁酸弧菌属内的一个单独物种,即解蛋白丁酸弧菌新组合(模式菌株B316(T)=ATCC 51982(T)=DSM 14932(T))。

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