Frigaard Niels-Ulrik, Dahl Christiane
Copenhagen Biocenter, Department of Biology, University of Copenhagen, Ole Maaløes Vej 5, 2200 Copenhagen N, Denmark.
Adv Microb Physiol. 2009;54:103-200. doi: 10.1016/S0065-2911(08)00002-7.
Phototrophic sulfur bacteria are characterized by oxidizing various inorganic sulfur compounds for use as electron donors in carbon dioxide fixation during anoxygenic photosynthetic growth. These bacteria are divided into the purple sulfur bacteria (PSB) and the green sulfur bacteria (GSB). They utilize various combinations of sulfide, elemental sulfur, and thiosulfate and sometimes also ferrous iron and hydrogen as electron donors. This review focuses on the dissimilatory and assimilatory metabolism of inorganic sulfur compounds in these bacteria and also briefly discusses these metabolisms in other types of anoxygenic phototrophic bacteria. The biochemistry and genetics of sulfur compound oxidation in PSB and GSB are described in detail. A variety of enzymes catalyzing sulfur oxidation reactions have been isolated from GSB and PSB (especially Allochromatium vinosum, a representative of the Chromatiaceae), and many are well characterized also on a molecular genetic level. Complete genome sequence data are currently available for 10 strains of GSB and for one strain of PSB. We present here a genome-based survey of the distribution and phylogenies of genes involved in oxidation of sulfur compounds in these strains. It is evident from biochemical and genetic analyses that the dissimilatory sulfur metabolism of these organisms is very complex and incompletely understood. This metabolism is modular in the sense that individual steps in the metabolism may be performed by different enzymes in different organisms. Despite the distant evolutionary relationship between GSB and PSB, their photosynthetic nature and their dependency on oxidation of sulfur compounds resulted in similar ecological roles in the sulfur cycle as important anaerobic oxidizers of sulfur compounds.
光合硫细菌的特点是在无氧光合生长过程中,氧化各种无机硫化合物,用作二氧化碳固定中的电子供体。这些细菌分为紫色硫细菌(PSB)和绿色硫细菌(GSB)。它们利用硫化物、元素硫和硫代硫酸盐的各种组合,有时还利用亚铁和氢气作为电子供体。本综述重点关注这些细菌中无机硫化合物的异化代谢和同化代谢,并简要讨论其他类型无氧光合细菌中的这些代谢。详细描述了紫色硫细菌和绿色硫细菌中硫化合物氧化的生物化学和遗传学。已经从绿色硫细菌和紫色硫细菌(特别是嗜硫色菌属的代表嗜硫色杆菌)中分离出多种催化硫氧化反应的酶,并且许多酶在分子遗传学水平上也得到了很好的表征。目前有10株绿色硫细菌和1株紫色硫细菌的全基因组序列数据。我们在此展示基于基因组的这些菌株中参与硫化合物氧化的基因的分布和系统发育研究。从生化和遗传分析中可以明显看出,这些生物体的异化硫代谢非常复杂,尚未完全了解。这种代谢是模块化的,因为代谢中的各个步骤可能由不同生物体中的不同酶执行。尽管绿色硫细菌和紫色硫细菌在进化上关系较远,但它们的光合性质以及对硫化合物氧化的依赖性,导致它们在硫循环中作为硫化合物的重要厌氧氧化剂具有相似的生态作用。