Vandecandelaere Ilse, Nercessian Olivier, Segaert Eveline, Achouak Wafa, Mollica Alfonso, Faimali Marco, De Vos Paul, Vandamme Peter
Laboratorium voor Microbiologie, Vakgroep Biochemie, Fysiologie en Microbiologie, Universiteit Gent, K. L. Ledeganckstraat 35, B-9000 Gent, Belgium.
Int J Syst Evol Microbiol. 2008 Nov;58(Pt 11):2589-96. doi: 10.1099/ijs.0.65691-0.
Thirty-five isolates obtained from a marine electroactive biofilm grown on a stainless steel cathode (Genoa, Italy) were investigated by a polyphasic taxonomic approach. Whole-cell fatty acid methyl ester analysis indicated that the isolates belonged to the class Gammaproteobacteria and were closely related or belonging to the genus Alteromonas. Genomic fingerprinting using the BOX-PCR primer delineated five clusters of isolates with similar BOX-PCR fingerprints. This study demonstrated that isolates from four of the BOX-PCR clusters belonged to Alteromonas macleodii and that the 14 isolates representing BOX-PCR cluster 1 constituted a novel species, which shared 98.4 % 16S rRNA gene sequence similarity with its nearest phylogenetic neighbour, Alteromonas hispanica. Both phenotypic and genotypic analyses enabled this novel species, for which the name Alteromonas genovensis sp. nov. is proposed, to be differentiated from established species of the genus Alteromonas. The DNA G+C content of Alteromonas genovensis sp. nov. is 44.5 mol% and the type strain is LMG 24078(T) (=CCUG 55340(T)).
采用多相分类方法对从生长在不锈钢阴极上的海洋电活性生物膜(意大利热那亚)分离得到的35株菌株进行了研究。全细胞脂肪酸甲酯分析表明,这些分离株属于γ-变形菌纲,与交替单胞菌属密切相关或属于该属。使用BOX-PCR引物进行基因组指纹分析,确定了具有相似BOX-PCR指纹的五个分离株簇。这项研究表明,BOX-PCR簇中的四个簇的分离株属于麦克劳德交替单胞菌,代表BOX-PCR簇1的14个分离株构成了一个新物种,其16S rRNA基因序列与其最接近的系统发育邻居西班牙交替单胞菌的相似性为98.4%。表型和基因型分析都使得这个新物种(提议命名为热那亚交替单胞菌Alteromonas genovensis sp. nov.)能够与交替单胞菌属已有的物种区分开来。热那亚交替单胞菌的DNA G+C含量为44.5 mol%,模式菌株为LMG 24078(T)(=CCUG 55340(T))。