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嗜热嗜盐厌氧菌奥氏嗜热栖热菌的基因组分析。

Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii.

作者信息

Mavromatis Konstantinos, Ivanova Natalia, Anderson Iain, Lykidis Athanasios, Hooper Sean D, Sun Hui, Kunin Victor, Lapidus Alla, Hugenholtz Philip, Patel Bharat, Kyrpides Nikos C

机构信息

DOE- Joint Genome Institute, Walnut Creek, California, United States of America.

出版信息

PLoS One. 2009;4(1):e4192. doi: 10.1371/journal.pone.0004192. Epub 2009 Jan 15.

Abstract

Halothermothirx orenii is a strictly anaerobic thermohalophilic bacterium isolated from sediment of a Tunisian salt lake. It belongs to the order Halanaerobiales in the phylum Firmicutes. The complete sequence revealed that the genome consists of one circular chromosome of 2578146 bps encoding 2451 predicted genes. This is the first genome sequence of an organism belonging to the Haloanaerobiales. Features of both Gram positive and Gram negative bacteria were identified with the presence of both a sporulating mechanism typical of Firmicutes and a characteristic Gram negative lipopolysaccharide being the most prominent. Protein sequence analyses and metabolic reconstruction reveal a unique combination of strategies for thermophilic and halophilic adaptation. H. orenii can serve as a model organism for the study of the evolution of the Gram negative phenotype as well as the adaptation under thermohalophilic conditions and the development of biotechnological applications under conditions that require high temperatures and high salt concentrations.

摘要

奥氏嗜热栖热菌是一种严格厌氧的嗜热嗜盐细菌,从突尼斯盐湖的沉积物中分离得到。它属于厚壁菌门嗜盐厌氧菌目。完整序列显示,该基因组由一条2578146碱基对的环状染色体组成,编码2451个预测基因。这是嗜盐厌氧菌目中一种生物的首个基因组序列。通过同时存在厚壁菌门典型的孢子形成机制和特征性的革兰氏阴性脂多糖,鉴定出了革兰氏阳性菌和革兰氏阴性菌的特征。蛋白质序列分析和代谢重建揭示了嗜热和嗜盐适应策略的独特组合。奥氏嗜热栖热菌可作为研究革兰氏阴性表型进化、嗜热嗜盐条件下的适应性以及在高温高盐浓度条件下开发生物技术应用的模式生物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/efcd/2626281/ba0f24714f68/pone.0004192.g001.jpg

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