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确定苹果萜类合酶中的钾离子结合区域。

Defining the potassium binding region in an apple terpene synthase.

作者信息

Green Sol, Squire Christopher J, Nieuwenhuizen Niels J, Baker Edward N, Laing William

机构信息

The New Zealand Institute for Plant and Food Research, Mt. Albert, Private Bag 92169, Auckland, New Zeland.

出版信息

J Biol Chem. 2009 Mar 27;284(13):8661-9. doi: 10.1074/jbc.M807140200. Epub 2009 Jan 29.

Abstract

Terpene synthases are a family of enzymes largely responsible for synthesizing the vast array of terpenoid compounds known to exist in nature. Formation of terpenoids from their respective 10-, 15-, or 20-carbon atom prenyl diphosphate precursors is initiated by divalent (M(2+)) metal ion-assisted electrophilic attack. In addition to M(2+), monovalent cations (M(+)) have also been shown to be essential for the activity of certain terpene synthases most likely by facilitating substrate binding or catalysis. An apple alpha-farnesene synthase (MdAFS1), which has a dependence upon potassium (K(+)), was used to identify active site regions that may be important for M(+) binding. Protein homology modeling revealed a surface-exposed loop (H-alphal loop) in MdAFS1 that fulfilled the necessary requirements for a K(+) binding region. Site-directed mutagenesis analysis of specific residues within this loop then revealed their crucial importance to this K(+) response and strongly implicated specific residues in direct K(+) binding. The role of the H-alphal loop in terpene synthase K(+) coordination was confirmed in a Conifer pinene synthase also using site-directed mutagenesis. These findings provide the first direct evidence for a specific M(+) binding region in two functionally and phylogenetically divergent terpene synthases. They also provide a basis for understanding K(+) activation in other terpene synthases and establish a new role for the H-alphal loop region in terpene synthase catalysis.

摘要

萜类合酶是一类酶,在很大程度上负责合成自然界中已知存在的大量萜类化合物。从其各自的含10、15或20个碳原子的异戊二烯基二磷酸前体形成萜类化合物是由二价(M(2+))金属离子辅助的亲电攻击引发的。除了M(2+)之外,单价阳离子(M(+))也已被证明对于某些萜类合酶的活性至关重要,这很可能是通过促进底物结合或催化来实现的。一种依赖钾离子(K(+))的苹果α-法尼烯合酶(MdAFS1)被用于鉴定可能对M(+)结合很重要的活性位点区域。蛋白质同源性建模揭示了MdAFS1中一个表面暴露的环(H-α1环),它满足了作为K(+)结合区域的必要条件。然后对该环内特定残基进行定点诱变分析,揭示了它们对这种K(+)反应的至关重要性,并强烈暗示特定残基直接参与K(+)结合。在一种针叶树蒎烯合酶中也使用定点诱变证实了H-α1环在萜类合酶K(+)配位中的作用。这些发现为两种功能和系统发育上不同的萜类合酶中特定的M(+)结合区域提供了首个直接证据。它们还为理解其他萜类合酶中的K(+)激活提供了基础,并确立了H-α1环区域在萜类合酶催化中的新作用。

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