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趋磁细菌中磁小体基因簇的比较分析为水平基因转移提供了进一步的证据。

Comparative analysis of magnetosome gene clusters in magnetotactic bacteria provides further evidence for horizontal gene transfer.

作者信息

Jogler Christian, Kube Michael, Schübbe Sabrina, Ullrich Susanne, Teeling Hanno, Bazylinski Dennis A, Reinhardt Richard, Schüler Dirk

机构信息

LMU Munich, Microbiology, Planegg-Martinsried, Germany.

出版信息

Environ Microbiol. 2009 May;11(5):1267-77. doi: 10.1111/j.1462-2920.2009.01854.x. Epub 2009 Feb 11.

Abstract

The organization of magnetosome genes was analysed in all available complete or partial genomic sequences of magnetotactic bacteria (MTB), including the magnetosome island (MAI) of the magnetotactic marine vibrio strain MV-1 determined in this study. The MAI was found to differ in gene content and organization between Magnetospirillum species and strains MV-1 or MC-1. Although a similar organization of magnetosome genes was found in all MTB, distinct variations in gene order and sequence similarity were uncovered that may account for the observed diversity of biomineralization, cell biology and magnetotaxis found in various MTB. While several magnetosome genes were present in all MTB, others were confined to Magnetospirillum species, indicating that the minimal set of genes required for magnetosome biomineralization might be smaller than previously suggested. A number of novel candidate genes were implicated in magnetosome formation by gene cluster comparison. Based on phylogenetic and compositional evidence we present a model for the evolution of magnetotaxis within the Alphaproteobacteria, which suggests the independent horizontal transfer of magnetosome genes from an unknown ancestor of magnetospirilla into strains MC-1 and MV-1.

摘要

对趋磁细菌(MTB)所有可获取的完整或部分基因组序列中的磁小体基因组织进行了分析,包括本研究中测定的趋磁海洋弧菌菌株MV-1的磁小体岛(MAI)。发现MAI在趋磁螺菌属物种与菌株MV-1或MC-1之间,基因含量和组织存在差异。尽管在所有MTB中发现了相似的磁小体基因组织,但也发现了基因顺序和序列相似性的明显差异,这可能解释了在各种MTB中观察到的生物矿化、细胞生物学和趋磁现象的多样性。虽然所有MTB中都存在几个磁小体基因,但其他一些基因仅限于趋磁螺菌属物种,这表明磁小体生物矿化所需的最小基因集可能比之前认为的要小。通过基因簇比较,发现了一些与磁小体形成有关的新候选基因。基于系统发育和组成证据,我们提出了一个α-变形菌纲内趋磁现象进化的模型,该模型表明磁小体基因从趋磁螺菌的未知祖先独立水平转移到菌株MC-1和MV-1中。

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