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猿猴病毒40基因组内反向重复DNA序列的定位

Mapping of inverted repeated DNA sequences within the genome of simian virus 40.

作者信息

Hsu M T, Jelinek W R

出版信息

Proc Natl Acad Sci U S A. 1977 Apr;74(4):1631-4. doi: 10.1073/pnas.74.4.1631.

DOI:10.1073/pnas.74.4.1631
PMID:193111
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC430845/
Abstract

Single-stranded, linear DNA of simian virus 40 (SV40) created by denaturing the endonuclease EcoRI- or Hpa II-generated, linear, double-stranded products from form I DNA of SV40 was analyzed for regions of inverted repeated sequences by visualization with the electron microscope. Six hairpin loops were found at positions 0.11-0.30 (two loops forming a "rabbit ears" structure), 0.47-0.52, 0.63-0.68, 0.70-0.76, and 0.90-0.96. The nucleotide sequences within all of these inverted repeats may be related since the looped regions can crosshybridize with one another and, thus, the SV40 genome may contain regions of interspersed repeated and unique sequences. The map positions of the 3' and 5' ends of the early and late messenger RNAs, as determined by others, lie within regions of inverted repeated sequences. Previously recorded recombination events that occurred either within the SV40 genome or between SV40 DNA and other genomes have apparently occurred frequently at positions of inverted repeated sequences within the SV40 DNA.

摘要

通过用电子显微镜观察,对由猿猴病毒40(SV40)的I型DNA经核酸内切酶EcoRI或Hpa II切割产生的线性双链产物变性后得到的单链线性DNA进行分析,以寻找反向重复序列区域。在0.11 - 0.30位置(两个环形成“兔耳”结构)、0.47 - 0.52、0.63 - 0.68、0.70 - 0.76和0.90 - 0.96处发现了六个发夹环。所有这些反向重复序列中的核苷酸序列可能有关联,因为成环区域可以相互交叉杂交,因此SV40基因组可能包含散布的重复序列和独特序列区域。如其他人所确定的,早期和晚期信使RNA的3'和5'末端的图谱位置位于反向重复序列区域内。先前记录的在SV40基因组内或SV40 DNA与其他基因组之间发生的重组事件显然经常发生在SV40 DNA内的反向重复序列位置。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3b2/430845/9c1622ec93b6/pnas00026-0336-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3b2/430845/9c1622ec93b6/pnas00026-0336-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3b2/430845/9c1622ec93b6/pnas00026-0336-a.jpg

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Mapping of inverted repeated DNA sequences within the genome of simian virus 40.猿猴病毒40基因组内反向重复DNA序列的定位
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Chromosoma. 1981;84(1):87-109. doi: 10.1007/BF00293365.
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本文引用的文献

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Structure of the DNA of the adenovirus 7-simian virus 40 hybrid, e46, by electron microscopy.通过电子显微镜观察腺病毒7-猴病毒40杂交体e46的DNA结构。
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Additive recombination in bacteria.细菌中的附加重组
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Binding and transcription of simian virus 40 DNA by DNA-dependent RNA polymerase from Escherichia coli.大肠杆菌依赖DNA的RNA聚合酶对猴病毒40 DNA的结合与转录
J Virol. 1978 Jan;25(1):298-304. doi: 10.1128/JVI.25.1.298-304.1978.
非洲爪蟾DNA中重复序列元件与非重复序列元件的总体散布情况。
J Mol Biol. 1973 Jun 15;77(1):1-23. doi: 10.1016/0022-2836(73)90359-8.
4
Double-helical regions in nuclear precursor of mRNA (pre-mRNA).信使核糖核酸前体(前体mRNA)中的双螺旋区域。
Biochim Biophys Acta. 1973 Jun 8;312(1):152-64. doi: 10.1016/0005-2787(73)90060-9.
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T7 early messenger RNAs are the direct products of ribonuclease III cleavage.T7早期信使核糖核酸是核糖核酸酶III切割的直接产物。
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T7 early RNAs and Escherichia coli ribosomal RNAs are cut from large precursor RNAs in vivo by ribonuclease 3.T7早期RNA和大肠杆菌核糖体RNA在体内由核糖核酸酶3从大的前体RNA中切割而来。
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Double-stranded regions in heterogeneous nuclear RNA from Hela cells.来自海拉细胞的不均一核RNA中的双链区域。
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Structure of two adenovirus-simian virus 40 hybrids which contain the entire SV40 genome.两种包含完整猿猴病毒40(SV40)基因组的腺病毒-猿猴病毒40杂交体的结构。
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