Rodríguez Dayté D, Grosse Christian, Himmel Sebastian, González César, de Ilarduya Iñaki M, Becker Stefan, Sheldrick George M, Usón Isabel
Instituto de Biología Molecular de Barcelona, Barcelona Science Park, Barcelona, Spain.
Nat Methods. 2009 Sep;6(9):651-3. doi: 10.1038/nmeth.1365. Epub 2009 Aug 16.
Ab initio macromolecular phasing has been so far limited to small proteins diffracting at atomic resolution (beyond 1.2 A) unless heavy atoms are present. We describe a general ab initio phasing method for 2 A data, based on combination of localizing model fragments such as small á-helices with Phaser and density modification with SHELXE. We implemented this approach in the program Arcimboldo to solve a 222-amino-acid structure at 1.95 A.
到目前为止,从头算大分子相位法仅限于在原子分辨率(超过1.2埃)下衍射的小蛋白质,除非存在重原子。我们描述了一种适用于2埃数据的通用从头算相位法,该方法基于将诸如小α螺旋等局部模型片段与Phaser相结合,并使用SHELXE进行密度修正。我们在Arcimboldo程序中实现了这种方法,以解析一个1.95埃分辨率下由222个氨基酸组成的结构。