Kim Byung-Chun, Lee Kang Hyun, Kim Mi Na, Kim Eun-Mi, Rhee Moon-Soo, Kwon O-Yu, Shin Kee-Sun
Biological Resources Center, KRIBB, Daejeon, Republic of Korea.
J Microbiol. 2009 Oct;47(5):530-5. doi: 10.1007/s12275-009-0270-z. Epub 2009 Oct 24.
A novel cellulolytic bacterium, strain S23(T), was isolated from the rhizosphere of the pine trees in Daejeon, Republic of Korea. This isolate was Gram-positive, strictly aerobic, rod-shaped, catalase-negative, oxidase-positive, motile by means of peritrichous flagella, and tested positive for alkaline phosphatase, esterase lipase, leucine arylamidase, alpha-galactosidase, and beta-galactosidase activities. The DNA G+C content was 49.5 mol%. The main cellular fatty acids were anteiso-C(15:0) (51.9%), iso-C(16:0) (14.7%), and iso-C(15:0) (13.2%). The major isoprenoid quinone was menaquinone 7 (MK-7). Diagnostic diamino acid in the cell-wall pepti-doglycan was meso-diaminopimelic acid. Comparative 16S rRNA gene sequence analysis showed that this strain clustered with Paenibacillus species. The 16S rRNA gene sequence similarity values between S23(T) and other Paenibacillus species were between 89.9% and 95.9%, and S23(T) was most closely related to Paenibacillus tarimensis SA-7-6(T). On the basis of phylogenetic and phenotypic properties of strain S23(T), the isolate is considered as a novel species belonging to the genus Paenibacillus. Therefore, the name, Paenibacillus pinihumi sp. nov., is proposed for the rhizosphere isolate; the type strain is S23(T) (=KCTC 13695(T) =KACC 14199(T) =JCM 16419(T)).
从韩国大田松树根际分离出一株新型纤维素分解菌,菌株S23(T)。该分离株为革兰氏阳性菌,严格需氧,杆状,过氧化氢酶阴性,氧化酶阳性,借助周生鞭毛运动,碱性磷酸酶、酯酶脂肪酶、亮氨酸芳基酰胺酶、α-半乳糖苷酶和β-半乳糖苷酶活性检测呈阳性。DNA G+C含量为49.5 mol%。主要细胞脂肪酸为anteiso-C(15:0)(51.9%)、iso-C(16:0)(14.7%)和iso-C(15:0)(13.2%)。主要类异戊二烯醌为甲基萘醌7(MK-7)。细胞壁肽聚糖中的诊断性二氨基酸为内消旋二氨基庚二酸。比较16S rRNA基因序列分析表明,该菌株与类芽孢杆菌属物种聚类。S23(T)与其他类芽孢杆菌属物种之间的16S rRNA基因序列相似性值在89.9%至95.9%之间,S23(T)与塔瑞类芽孢杆菌SA-7-6(T)关系最为密切。基于菌株S23(T)的系统发育和表型特征,该分离株被认为是类芽孢杆菌属中的一个新物种。因此,提议将该根际分离株命名为松根类芽孢杆菌新种;模式菌株为S23(T)(=KCTC 13695(T)=KACC 14199(T)=JCM 16419(T))。