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从单一视角确定三维结构。

Three-dimensional structure determination from a single view.

机构信息

[1] Department of Physics and Astronomy, [2] California NanoSystems Institute.

出版信息

Nature. 2010 Jan 14;463(7278):214-7. doi: 10.1038/nature08705. Epub 2009 Dec 16.

Abstract

The ability to determine the structure of matter in three dimensions has profoundly advanced our understanding of nature. Traditionally, the most widely used schemes for three-dimensional (3D) structure determination of an object are implemented by acquiring multiple measurements over various sample orientations, as in the case of crystallography and tomography, or by scanning a series of thin sections through the sample, as in confocal microscopy. Here we present a 3D imaging modality, termed ankylography (derived from the Greek words ankylos meaning 'curved' and graphein meaning 'writing'), which under certain circumstances enables complete 3D structure determination from a single exposure using a monochromatic incident beam. We demonstrate that when the diffraction pattern of a finite object is sampled at a sufficiently fine scale on the Ewald sphere, the 3D structure of the object is in principle determined by the 2D spherical pattern. We confirm the theoretical analysis by performing 3D numerical reconstructions of a sodium silicate glass structure at 2 A resolution, and a single poliovirus at 2-3 nm resolution, from 2D spherical diffraction patterns alone. Using diffraction data from a soft X-ray laser, we also provide a preliminary demonstration that ankylography is experimentally feasible by obtaining a 3D image of a test object from a single 2D diffraction pattern. With further development, this approach of obtaining complete 3D structure information from a single view could find broad applications in the physical and life sciences.

摘要

确定物质三维结构的能力极大地促进了我们对自然的理解。传统上,用于三维(3D)物体结构确定的最广泛使用的方案是通过在不同的样本取向下获取多个测量值来实现,如在晶体学和层析成像中,或者通过在样本中扫描一系列薄切片来实现,如在共聚焦显微镜中。在这里,我们提出了一种称为 ankylography(源于希腊语 ankylos 意为“弯曲的”和 graphein 意为“书写”)的 3D 成像模式,在某些情况下,它可以从单个曝光中使用单色入射光束完成完整的 3D 结构确定。我们证明,当有限物体的衍射图案在埃瓦尔德球上以足够精细的尺度进行采样时,物体的 3D 结构原则上由 2D 球形图案决定。我们通过对 2A 分辨率的硅酸钠玻璃结构和 2-3nm 分辨率的单个脊髓灰质炎病毒进行 3D 数值重建,从单独的 2D 球形衍射图案证实了理论分析。使用软 X 射线激光的衍射数据,我们还通过从单个 2D 衍射图案获得测试物体的 3D 图像,初步证明了 ankylography 在实验上是可行的。随着进一步的发展,这种从单个视角获取完整 3D 结构信息的方法可能会在物理和生命科学中得到广泛应用。

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