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1
, a program for rapid shape determination in small-angle scattering.用于小角散射中快速形状测定的一个程序。
J Appl Crystallogr. 2009 Apr 1;42(Pt 2):342-346. doi: 10.1107/S0021889809000338. Epub 2009 Jan 24.
2
New developments in the program package for small-angle scattering data analysis.小角散射数据分析程序包的新进展。
J Appl Crystallogr. 2012 Mar 15;45(Pt 2):342-350. doi: 10.1107/S0021889812007662. eCollection 2012 Apr 1.
3
X-ray structure of Pur-alpha reveals a Whirly-like fold and an unusual nucleic-acid binding surface.Pur-alpha的X射线结构揭示了一种类似Whirly的折叠结构和一个不同寻常的核酸结合表面。
Proc Natl Acad Sci U S A. 2009 Nov 3;106(44):18521-6. doi: 10.1073/pnas.0907990106. Epub 2009 Oct 21.
4
Structural analysis of lipocalin-type prostaglandin D synthase complexed with biliverdin by small-angle X-ray scattering and multi-dimensional NMR.小角 X 射线散射和多维 NMR 研究胆红素结合脂氧合酶型前列腺素 D 合酶复合物的结构。
J Struct Biol. 2010 Feb;169(2):209-18. doi: 10.1016/j.jsb.2009.10.005. Epub 2009 Oct 13.
5
Structural evaluation of potent NKT cell agonists: implications for design of novel stimulatory ligands.强效NKT细胞激动剂的结构评估:对新型刺激配体设计的启示
J Mol Biol. 2009 Nov 20;394(1):71-82. doi: 10.1016/j.jmb.2009.08.061. Epub 2009 Sep 2.
6
Atomic structures of two novel immunoglobulin-like domain pairs in the actin cross-linking protein filamin.肌动蛋白交联蛋白细丝蛋白中两个新型免疫球蛋白样结构域对的原子结构。
J Biol Chem. 2009 Sep 11;284(37):25450-8. doi: 10.1074/jbc.M109.019661. Epub 2009 Jul 21.
7
Structure and flexibility within proteins as identified through small angle X-ray scattering.通过小角X射线散射确定的蛋白质结构与灵活性
Gen Physiol Biophys. 2009 Jun;28(2):174-89. doi: 10.4149/gpb_2009_02_174.
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Structure of the sporulation histidine kinase inhibitor Sda from Bacillus subtilis and insights into its solution state.枯草芽孢杆菌芽孢形成组氨酸激酶抑制剂Sda的结构及其溶液状态解析
Acta Crystallogr D Biol Crystallogr. 2009 Jun;65(Pt 6):574-81. doi: 10.1107/S090744490901169X. Epub 2009 May 15.
9
Analysis of PKR structure by small-angle scattering.通过小角散射分析PKR结构。
J Mol Biol. 2009 Apr 10;387(4):910-20. doi: 10.1016/j.jmb.2009.02.019. Epub 2009 Feb 14.
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The structure of the MAP2K MEK6 reveals an autoinhibitory dimer.丝裂原活化蛋白激酶激酶6(MAP2K MEK6)的结构揭示了一种自抑制二聚体。
Structure. 2009 Jan 14;17(1):96-104. doi: 10.1016/j.str.2008.11.007.

小角散射在结构生物学中的应用——拓展前沿,避免陷阱。

Small-angle scattering for structural biology--expanding the frontier while avoiding the pitfalls.

机构信息

School of Molecular and Microbial Biosciences, The University of Sydney, Sydney, New South Wales 2006, Australia.

出版信息

Protein Sci. 2010 Apr;19(4):642-57. doi: 10.1002/pro.351.

DOI:10.1002/pro.351
PMID:20120026
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2867006/
Abstract

The last decade has seen a dramatic increase in the use of small-angle scattering for the study of biological macromolecules in solution. The drive for more complete structural characterization of proteins and their interactions, coupled with the increasing availability of instrumentation and easy-to-use software for data analysis and interpretation, is expanding the utility of the technique beyond the domain of the biophysicist and into the realm of the protein scientist. However, the absence of publication standards and the ease with which 3D models can be calculated against the inherently 1D scattering data means that an understanding of sample quality, data quality, and modeling assumptions is essential to have confidence in the results. This review is intended to provide a road map through the small-angle scattering experiment, while also providing a set of guidelines for the critical evaluation of scattering data. Examples of current best practice are given that also demonstrate the power of the technique to advance our understanding of protein structure and function.

摘要

过去十年中,小角散射技术在研究溶液中的生物大分子方面得到了广泛应用。人们越来越需要对蛋白质及其相互作用进行更完整的结构表征,同时仪器设备也越来越普及,数据分析和解释的软件也易于使用,这使得该技术的应用范围不仅限于生物物理学家,还扩展到了蛋白质科学家领域。然而,由于缺乏出版标准,以及可以根据固有一维散射数据轻松计算三维模型,因此,为了对结果有信心,必须了解样品质量、数据质量和建模假设。本文旨在为小角散射实验提供一个路线图,同时为散射数据的关键评估提供一套准则。本文还给出了当前最佳实践的示例,这些示例也展示了该技术在推进我们对蛋白质结构和功能的理解方面的强大功能。