Department of Bio and Environmental Technology, College of Natural Science, Seoul Women's University, Seoul 139-774, Republic of Korea.
J Microbiol. 2011 Aug;49(4):610-6. doi: 10.1007/s12275-011-1017-1. Epub 2011 Sep 2.
Two strains PB196(T) and PB62(T) of Gram-negative, non-motile, and non-spore-forming bacteria, were isolated from soil in South Korea and characterized to determine their taxonomic positions. 16S rRNA gene sequence analysis showed that the two strains belonged to the genus Sphingomonas. The highest degree of sequence similarity of strain PB196(T) was found with PB62(T) (98.9%), Sphingomonas humi PB323(T) (98.9%), Sphingomonas kaistensis PB56(T) (98.2%), and Sphingomonas astaxanthinifaciens TDMA-17(T) (98.0%). The highest degree of sequence similarity of strain PB62(T) was found with Sphingomonas humi PB323(T) (98.8%), Sphingomonas astaxanthinifaciens TDMA-17(T) (98.2%), and Sphingomonas kaistensis PB56(T) (98.1%). Chemotaxonomic data revealed that they possessed ubiquinone-10 (Q-10) as common in the genus Sphingomonas, that the predominant fatty acids were summed feature 7 (C(18:1) ω7c/ω9t/ω12t), summed feature 4 (C(16:1) ω7c/C(15:0) iso 2OH), C(16:0), and C(17:1) ω6c, and that they contained sphingoglycolipid, phosphatidylglycerol (PG), and phosphatidyle-thanolamine (PE) in common but they showed difference for diphosphatidylglycerol (DPG). Based on these data, PB196(T) (=KCTC 12339(T) =JCM 16604(T)) and PB62(T) (=KCTC 12336(T) =JCM 16605(T) =KEMB 9004-005(T)) should be classified as type strains of two novel species, for which the names Sphingomonas rosea sp. nov. and Sphingomonas swuensis sp. nov. are proposed, respectively.
两株革兰氏阴性、非运动性、非孢子形成的细菌 PB196(T) 和 PB62(T) 从韩国土壤中分离出来,并对其进行了特征描述,以确定它们的分类地位。16S rRNA 基因序列分析表明,这两株细菌属于鞘氨醇单胞菌属。菌株 PB196(T) 与 PB62(T)(98.9%)、PB323(T)(98.9%)、PB56(T)(98.2%)和 TDMA-17(T)(98.0%)的序列相似性最高。菌株 PB62(T) 与 PB323(T)(98.8%)、TDMA-17(T)(98.2%)和 PB56(T)(98.1%)的序列相似性最高。化学分类学数据表明,它们都含有泛醌-10(Q-10),这是鞘氨醇单胞菌属的共同特征,它们的主要脂肪酸是 summed feature 7(C(18:1) ω7c/ω9t/ω12t)、 summed feature 4(C(16:1) ω7c/C(15:0) iso 2OH)、C(16:0) 和 C(17:1) ω6c,它们都含有神经酰胺糖脂、磷脂酰甘油(PG)和磷脂酰乙醇胺(PE),但它们的二磷脂酰甘油(DPG)不同。基于这些数据,PB196(T)=KCTC 12339(T)=JCM 16604(T)和 PB62(T)=KCTC 12336(T)=JCM 16605(T)=KEMB 9004-005(T)应被归类为两个新种的模式株,分别命名为玫瑰鞘氨醇单胞菌新种和 swuensis 鞘氨醇单胞菌新种。