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滨海纤维杆菌属,新属,纤维形细菌,来自于潮汐滩涂,隶属于噬纤维菌科。修订 2008 年魏昂等描述的鲁达内拉属。

Fibrella aestuarina gen. nov., sp. nov., a filamentous bacterium of the family Cytophagaceae isolated from a tidal flat, and emended description of the genus Rudanella Weon et al. 2008.

机构信息

Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.

Functional Genomics Center Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.

出版信息

Int J Syst Evol Microbiol. 2011 Jan;61(Pt 1):184-189. doi: 10.1099/ijs.0.020503-0. Epub 2010 Feb 26.

Abstract

A Gram-staining-negative, pink bacterium, designated strain BUZ 2(T), was isolated from coastal mud from the North Sea (Fedderwardersiel, Germany). Cells were rod-shaped and able to form multicellular filaments. Growth after 7 days was observed at 10-40 °C, at pH 6-8 and with 0-0.5 % NaCl. The phylogenetic tree based on 16S rRNA gene sequences indicated that strain BUZ 2(T) is a member of the family Cytophagaceae, its closest neighbours being Rudanella lutea 5715S-11(T), Spirosoma linguale LMG 10896(T) and Spirosoma panaciterrae Gsoil 1519(T) (87.8, 86.4 and 86.1 % sequence similarity, respectively). The major fatty acids were summed feature 3 (comprising C(16 : 1)ω7c and/or iso-C(15 : 0) 2-OH), C(16 : 1)ω5c and iso-C(15 : 0). The predominant respiratory quinone was MK-7 and the major polar lipids were phosphatidylethanolamine and several unidentified aminophospholipids. The DNA G+C content was 56.5 mol%. On the basis of this polyphasic study, we propose that strain BUZ 2(T) represents a novel genus and species, for which the name Fibrella aestuarina gen. nov., sp. nov. is proposed. The type strain of Fibrella aestuarina is BUZ 2(T) (=DSM 22563(T) =CCUG 58136(T)). An emended description of the genus Rudanella is also proposed.

摘要

一株革兰氏阴性、粉红色的细菌,被命名为 BUZ 2(T) 株,是从北海(德国费德瓦尔德塞尔)的沿海泥中分离得到的。细胞呈杆状,能够形成多细胞丝。在 10-40°C、pH 值为 6-8 和 0-0.5%NaCl 的条件下,7 天后观察到生长。基于 16S rRNA 基因序列的系统发育树表明,BUZ 2(T) 株是噬纤维菌科的一个成员,其最接近的近缘种为鲁达内拉 lutea 5715S-11(T)、动弯杆菌 LMG 10896(T)和土壤螺旋体 Gsoil 1519(T)(分别为 87.8%、86.4%和 86.1%的序列相似性)。主要脂肪酸为 sum feature 3(包含 C(16 : 1)ω7c 和/或 iso-C(15 : 0) 2-OH)、C(16 : 1)ω5c 和 iso-C(15 : 0)。主要的呼吸醌为 MK-7,主要的极性脂为磷脂酰乙醇胺和几种未鉴定的氨基磷脂。DNA G+C 含量为 56.5mol%。基于多相研究,我们建议 BUZ 2(T) 株代表一个新的属和种,提议将其命名为河口纤维菌属 nov.,种 nov.,Fibrella aestuarina gen. nov.,sp. nov.。河口纤维菌的模式菌株为 BUZ 2(T)(=DSM 22563(T)=CCUG 58136(T))。还提出了鲁达内拉属的修订描述。

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