Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.
Functional Genomics Center Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.
Int J Syst Evol Microbiol. 2011 Jan;61(Pt 1):184-189. doi: 10.1099/ijs.0.020503-0. Epub 2010 Feb 26.
A Gram-staining-negative, pink bacterium, designated strain BUZ 2(T), was isolated from coastal mud from the North Sea (Fedderwardersiel, Germany). Cells were rod-shaped and able to form multicellular filaments. Growth after 7 days was observed at 10-40 °C, at pH 6-8 and with 0-0.5 % NaCl. The phylogenetic tree based on 16S rRNA gene sequences indicated that strain BUZ 2(T) is a member of the family Cytophagaceae, its closest neighbours being Rudanella lutea 5715S-11(T), Spirosoma linguale LMG 10896(T) and Spirosoma panaciterrae Gsoil 1519(T) (87.8, 86.4 and 86.1 % sequence similarity, respectively). The major fatty acids were summed feature 3 (comprising C(16 : 1)ω7c and/or iso-C(15 : 0) 2-OH), C(16 : 1)ω5c and iso-C(15 : 0). The predominant respiratory quinone was MK-7 and the major polar lipids were phosphatidylethanolamine and several unidentified aminophospholipids. The DNA G+C content was 56.5 mol%. On the basis of this polyphasic study, we propose that strain BUZ 2(T) represents a novel genus and species, for which the name Fibrella aestuarina gen. nov., sp. nov. is proposed. The type strain of Fibrella aestuarina is BUZ 2(T) (=DSM 22563(T) =CCUG 58136(T)). An emended description of the genus Rudanella is also proposed.
一株革兰氏阴性、粉红色的细菌,被命名为 BUZ 2(T) 株,是从北海(德国费德瓦尔德塞尔)的沿海泥中分离得到的。细胞呈杆状,能够形成多细胞丝。在 10-40°C、pH 值为 6-8 和 0-0.5%NaCl 的条件下,7 天后观察到生长。基于 16S rRNA 基因序列的系统发育树表明,BUZ 2(T) 株是噬纤维菌科的一个成员,其最接近的近缘种为鲁达内拉 lutea 5715S-11(T)、动弯杆菌 LMG 10896(T)和土壤螺旋体 Gsoil 1519(T)(分别为 87.8%、86.4%和 86.1%的序列相似性)。主要脂肪酸为 sum feature 3(包含 C(16 : 1)ω7c 和/或 iso-C(15 : 0) 2-OH)、C(16 : 1)ω5c 和 iso-C(15 : 0)。主要的呼吸醌为 MK-7,主要的极性脂为磷脂酰乙醇胺和几种未鉴定的氨基磷脂。DNA G+C 含量为 56.5mol%。基于多相研究,我们建议 BUZ 2(T) 株代表一个新的属和种,提议将其命名为河口纤维菌属 nov.,种 nov.,Fibrella aestuarina gen. nov.,sp. nov.。河口纤维菌的模式菌株为 BUZ 2(T)(=DSM 22563(T)=CCUG 58136(T))。还提出了鲁达内拉属的修订描述。