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限界纤维单胞菌属,新属,一种从潮滩中分离得到的丝状细菌。

Fibrisoma limi gen. nov., sp. nov., a filamentous bacterium isolated from tidal flats.

机构信息

Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.

Center for Microscopy and Image Analysis, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.

出版信息

Int J Syst Evol Microbiol. 2011 Jun;61(Pt 6):1418-1424. doi: 10.1099/ijs.0.025395-0. Epub 2010 Jul 2.

Abstract

An orange-pigmented, Gram-staining-negative, non-motile, filament-forming, rod-shaped bacterium (BUZ 3(T)) was isolated from a coastal mud sample from the North Sea (Fedderwardersiel, Germany) and characterized taxonomically using a polyphasic approach. According to 16S rRNA gene sequence data, it belonged to the family Cytophagaceae, exhibiting low 16S rRNA gene sequence similarity (<90 %) with members of the genera Spirosoma, Rudanella and Fibrella. The DNA G+C content was 52.0 mol%. The major fatty acids were summed feature 3 (comprising C(16 : 1)ω7c and/or iso-C(15 : 0) 2-OH), C(16 : 1)ω5c and iso-C(17 : 0) 3-OH. The major polar lipids consisted of phosphatidylethanolamine and several aminolipids. On the basis of phenotypic, chemotaxonomic and phylogenetic data, it is proposed that strain BUZ 3(T) represents a novel genus and species, for which the name Fibrisoma limi gen. nov., sp. nov. is proposed. The type strain is BUZ 3(T) ( = DSM 22564(T)  = CCUG 58137(T)).

摘要

从北海(德国费德瓦尔德西耶尔)的沿海泥样中分离到一株橙色、革兰氏染色阴性、非运动、丝状、杆状细菌(BUZ 3(T)),并采用多相分类法对其进行了分类学表征。根据 16S rRNA 基因序列数据,它属于噬纤维菌科,与 Spirosoma、Rudanella 和 Fibrella 属的成员的 16S rRNA 基因序列相似性较低(<90%)。DNA G+C 含量为 52.0 mol%。主要脂肪酸为 sum feature 3(包含 C(16:1)ω7c 和/或 iso-C(15:0) 2-OH)、C(16:1)ω5c 和 iso-C(17:0) 3-OH。主要极性脂包括磷脂酰乙醇胺和几种胺脂。基于表型、化学生态和系统发育数据,建议该菌株 BUZ 3(T) 代表一个新属和新种,命名为 Fibrisoma limi 属。nov.,sp. nov.。其模式菌株为 BUZ 3(T)(=DSM 22564(T)=CCUG 58137(T))。

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