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新种哈氏螺菌(Spirosoma harenae sp. nov.),一种从沙滩分离出的细菌。

Spirosoma harenae sp. nov., a Bacterium Isolated from a Sandy Beach.

作者信息

Ten Leonid N, Elderiny Nabil, Lee Jae-Jin, Lee Seung-Yeol, Park Sangkyu, Lee Dae Sung, Kim Myung Kyum, Jung Hee-Young

机构信息

School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.

Department of Environmental Engineering, Kyungpook National University, Daegu, 41566, Republic of Korea.

出版信息

Curr Microbiol. 2018 Feb;75(2):179-185. doi: 10.1007/s00284-017-1363-2. Epub 2017 Oct 11.

Abstract

A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, aerobic bacterium, designated 15J8-9, was isolated from a sandy beach in Jeju Island, South Korea. The isolate was able to grow between 10 and 30 °C, pH 5-8, and in presence of 0-1% (w/v) NaCl. Based on 16S rRNA gene phylogenetic analysis, the novel strain was closely related to members of the genus Spirosoma (96.1-90.9% similarities) and showed highest sequence similarity to Spirosoma panaciterrae DSM 21099 (96.1%). The G + C content of the genomic DNA of strain 15J8-9 was 45.1 mol%. The isolate contained menaquinone MK-7 as the predominant respiratory quinone, phosphatidylethanolamine as the major polar lipid, and summed feature 3 (C ω6c/C ω7c; 28.0%), C ω5c (23.4%), iso-C (13.5%), and C (11.5%) as the major fatty acids that supported the affiliation of strain 15J8-9 to the genus Spirosoma. The isolate could be differentiated clearly from recognized Spirosoma species on the basis of several phenotypic, genotypic and chemotaxonomic features. Therefore, strain 15J8-9 is considered to represent a novel species of the genus the genus Spirosoma, for which the name Spirosoma harenae sp. nov. is proposed. The type strain is 15J8-9 (= KCTC 52030 = JCM 31993).

摘要

从韩国济州岛的沙滩分离出一株革兰氏染色阴性、无运动性、不形成芽孢、杆状、需氧的细菌,命名为15J8-9。该菌株能够在10至30°C、pH值5至8以及0至1%(w/v)NaCl存在的条件下生长。基于16S rRNA基因系统发育分析,该新菌株与螺旋体属成员密切相关(相似性为96.1-90.9%),与泛酸螺旋体DSM 21099的序列相似性最高(96.1%)。菌株15J8-9基因组DNA的G+C含量为45.1 mol%。该菌株以甲基萘醌MK-7作为主要呼吸醌,以磷脂酰乙醇胺作为主要极性脂质,以总和特征3(C ω6c/C ω7c;28.0%)、C ω5c(23.4%)、异-C(13.5%)和C(11.5%)作为主要脂肪酸,这些特征支持菌株15J8-9属于螺旋体属。基于几个表型、基因型和化学分类学特征,该菌株可以与已确认的螺旋体物种明显区分开来。因此,菌株15J8-9被认为代表螺旋体属的一个新物种,为此提出名为沙栖螺旋体(Spirosoma harenae sp. nov.)。模式菌株为15J8-9(=KCTC 52030=JCM 31993)。

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