Ten Leonid N, Elderiny Nabil, Lee Jae-Jin, Lee Seung-Yeol, Park Sangkyu, Lee Dae Sung, Kim Myung Kyum, Jung Hee-Young
School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.
Department of Environmental Engineering, Kyungpook National University, Daegu, 41566, Republic of Korea.
Curr Microbiol. 2018 Feb;75(2):179-185. doi: 10.1007/s00284-017-1363-2. Epub 2017 Oct 11.
A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, aerobic bacterium, designated 15J8-9, was isolated from a sandy beach in Jeju Island, South Korea. The isolate was able to grow between 10 and 30 °C, pH 5-8, and in presence of 0-1% (w/v) NaCl. Based on 16S rRNA gene phylogenetic analysis, the novel strain was closely related to members of the genus Spirosoma (96.1-90.9% similarities) and showed highest sequence similarity to Spirosoma panaciterrae DSM 21099 (96.1%). The G + C content of the genomic DNA of strain 15J8-9 was 45.1 mol%. The isolate contained menaquinone MK-7 as the predominant respiratory quinone, phosphatidylethanolamine as the major polar lipid, and summed feature 3 (C ω6c/C ω7c; 28.0%), C ω5c (23.4%), iso-C (13.5%), and C (11.5%) as the major fatty acids that supported the affiliation of strain 15J8-9 to the genus Spirosoma. The isolate could be differentiated clearly from recognized Spirosoma species on the basis of several phenotypic, genotypic and chemotaxonomic features. Therefore, strain 15J8-9 is considered to represent a novel species of the genus the genus Spirosoma, for which the name Spirosoma harenae sp. nov. is proposed. The type strain is 15J8-9 (= KCTC 52030 = JCM 31993).
从韩国济州岛的沙滩分离出一株革兰氏染色阴性、无运动性、不形成芽孢、杆状、需氧的细菌,命名为15J8-9。该菌株能够在10至30°C、pH值5至8以及0至1%(w/v)NaCl存在的条件下生长。基于16S rRNA基因系统发育分析,该新菌株与螺旋体属成员密切相关(相似性为96.1-90.9%),与泛酸螺旋体DSM 21099的序列相似性最高(96.1%)。菌株15J8-9基因组DNA的G+C含量为45.1 mol%。该菌株以甲基萘醌MK-7作为主要呼吸醌,以磷脂酰乙醇胺作为主要极性脂质,以总和特征3(C ω6c/C ω7c;28.0%)、C ω5c(23.4%)、异-C(13.5%)和C(11.5%)作为主要脂肪酸,这些特征支持菌株15J8-9属于螺旋体属。基于几个表型、基因型和化学分类学特征,该菌株可以与已确认的螺旋体物种明显区分开来。因此,菌株15J8-9被认为代表螺旋体属的一个新物种,为此提出名为沙栖螺旋体(Spirosoma harenae sp. nov.)。模式菌株为15J8-9(=KCTC 52030=JCM 31993)。