College of Life Science, Sichuan Normal University, Chengdu, 610061, PR China.
Int J Syst Evol Microbiol. 2011 Jan;61(Pt 1):165-169. doi: 10.1099/ijs.0.020321-0. Epub 2010 Feb 26.
A cholesterol side-chain-cleaving bacterial strain, AD-6(T), was isolated from fresh faeces of a clouded leopard (Neofelis nebulosa) and was studied using a polyphasic taxonomic approach. 16S rRNA gene sequence analysis showed that the novel strain formed a distinct subline within the genus Gordonia, its closest neighbours being the type strains of Gordonia cholesterolivorans, Gordonia sihwensis and Gordonia hydrophobica, with sequence similarity values of 98.2, 97.8 and 97.6 %, respectively. The gyrB gene sequence of strain AD-6(T) exhibited similarities of 77-91 % with those of the type strains of recognized species of the genus Gordonia, being most similar to the type strains of G. sihwensis, G. hydrophobica and Gordonia hirsuta (91, 87 and 84 % similarity, respectively). The results of whole-cell fatty acid analyses and DNA-DNA relatedness data readily distinguished the new isolate from its nearest neighbours. Strain AD-6(T) is therefore considered to represent a novel species of the genus Gordonia, for which the name Gordonia neofelifaecis sp. nov. is proposed. The type strain is AD-6(T) (=NRRL B-59395(T)=CCTCC AB-209144(T)).
从云豹(Neofelis nebulosa)新鲜粪便中分离出一株胆固醇侧链裂解细菌 AD-6(T),并采用多相分类方法进行了研究。16S rRNA 基因序列分析表明,该新菌株在戈登氏菌属内形成了一个独特的亚群,其最接近的亲缘菌株为胆固醇氧化戈登氏菌、西峡戈登氏菌和疏水性戈登氏菌的模式菌株,序列相似性值分别为 98.2%、97.8%和 97.6%。菌株 AD-6(T)的 gyrB 基因序列与公认的戈登氏菌属种的模式菌株相似性为 77-91%,与西峡戈登氏菌、疏水性戈登氏菌和毛戈登氏菌的模式菌株最为相似(相似度分别为 91%、87%和 84%)。全细胞脂肪酸分析和 DNA-DNA 同源性数据的结果很容易将新分离株与最接近的亲缘菌株区分开来。因此,菌株 AD-6(T)被认为代表了戈登氏菌属的一个新种,现提议将其命名为新云豹粪戈登氏菌(Gordonia neofelifaecis sp. nov.)。其模式菌株为 AD-6(T)(=NRRL B-59395(T)=CCTCC AB-209144(T))。