• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

光笼 t7 RNA 聚合酶用于原核和真核细胞中转录和基因功能的光激活。

Photocaged t7 RNA polymerase for the light activation of transcription and gene function in pro- and eukaryotic cells.

机构信息

Department of Chemistry, North Carolina State University, Raleigh, NC 27695, USA.

出版信息

Chembiochem. 2010 May 3;11(7):972-7. doi: 10.1002/cbic.201000041.

DOI:10.1002/cbic.201000041
PMID:20301166
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3762680/
Abstract

A light-activatable bacteriophage T7 RNA polymerase (T7RNAP) has been generated through the site-specific introduction of a photocaged tyrosine residue at the crucial position Tyr639 within the active site of the enzyme. The photocaged tyrosine disrupts polymerase activity by blocking the incoming nucleotide from reaching the active site of the enzyme. However, a brief irradiation with nonphototoxic UV light of 365 nm removes the ortho-nitrobenzyl caging group from Tyr639 and restores the RNA polymerase activity of T7RNAP. The complete orthogonality of T7RNAP to all endogenous RNA polymerases in pro- and eukaryotic systems allowed for the photochemical activation of gene expression in bacterial and mammalian cells. Specifically, E. coli cells were engineered to produce photocaged T7RNAP in the presence of a GFP reporter gene under the control of a T7 promoter. UV irradiation of these cells led to the spatiotemporal activation of GFP expression. In an analogous fashion, caged T7RNAP was transfected into human embryonic kidney (HEK293T) cells. Irradiation with UV light led to the activation of T7RNAP, thereby inducing RNA polymerization and expression of a luciferase reporter gene in tissue culture. The ability to achieve spatiotemporal regulation of orthogonal RNA synthesis enables the precise dissection and manipulation of a wide range of cellular events, including gene function.

摘要

一种光激活的噬菌体 T7 RNA 聚合酶(T7RNAP)通过在酶的活性位点内关键位置 Tyr639 处特异性引入光笼酪氨酸残基而产生。光笼酪氨酸通过阻止进入的核苷酸到达酶的活性位点来破坏聚合酶活性。然而,用非光毒性的 365nm 紫外光短暂照射会从 Tyr639 上去除邻硝基苄基笼状基团,并恢复 T7RNAP 的 RNA 聚合酶活性。T7RNAP 与原核和真核生物系统中所有内源性 RNA 聚合酶的完全正交性允许在细菌和哺乳动物细胞中进行光化学基因表达的激活。具体来说,通过 GFP 报告基因在 T7 启动子的控制下,工程菌细胞被设计为在存在 GFP 报告基因的情况下产生光笼 T7RNAP。对这些细胞进行 UV 照射会导致 GFP 表达的时空激活。以类似的方式,将光笼 T7RNAP 转染到人胚肾(HEK293T)细胞中。用紫外光照射会导致 T7RNAP 的激活,从而诱导 RNA 聚合酶和组织培养中荧光素酶报告基因的表达。实现正交 RNA 合成时空调节的能力使我们能够精确剖析和操纵广泛的细胞事件,包括基因功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/9698a7d15b66/nihms505418f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/6286cfd69652/nihms505418f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/8575f570f5e8/nihms505418f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/98324ca0c38f/nihms505418f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/2ff3835a8de9/nihms505418f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/83c6487de13d/nihms505418f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/361aa199b1dc/nihms505418f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/9698a7d15b66/nihms505418f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/6286cfd69652/nihms505418f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/8575f570f5e8/nihms505418f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/98324ca0c38f/nihms505418f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/2ff3835a8de9/nihms505418f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/83c6487de13d/nihms505418f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/361aa199b1dc/nihms505418f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/895c/3762680/9698a7d15b66/nihms505418f7.jpg

相似文献

1
Photocaged t7 RNA polymerase for the light activation of transcription and gene function in pro- and eukaryotic cells.光笼 t7 RNA 聚合酶用于原核和真核细胞中转录和基因功能的光激活。
Chembiochem. 2010 May 3;11(7):972-7. doi: 10.1002/cbic.201000041.
2
Genetically encoded light-activated transcription for spatiotemporal control of gene expression and gene silencing in mammalian cells.用于哺乳动物细胞中基因表达和基因沉默的时空控制的基因编码光激活转录。
J Am Chem Soc. 2013 Sep 11;135(36):13433-9. doi: 10.1021/ja4051026. Epub 2013 Aug 27.
3
Building an Inducible T7 RNA Polymerase/T7 Promoter Circuit in Synechocystis sp. PCC6803.在集胞藻6803中构建诱导型T7 RNA聚合酶/T7启动子回路
ACS Synth Biol. 2019 Apr 19;8(4):655-660. doi: 10.1021/acssynbio.8b00515. Epub 2019 Apr 3.
4
Structural basis for initiation of transcription from an RNA polymerase-promoter complex.RNA聚合酶-启动子复合物转录起始的结构基础。
Nature. 1999 May 6;399(6731):80-3. doi: 10.1038/19999.
5
Dynamic Blue Light-Inducible T7 RNA Polymerases (Opto-T7RNAPs) for Precise Spatiotemporal Gene Expression Control.用于精确时空基因表达控制的动态蓝光诱导型T7 RNA聚合酶(光控T7 RNA聚合酶)
ACS Synth Biol. 2017 Nov 17;6(11):2157-2167. doi: 10.1021/acssynbio.7b00169. Epub 2017 Oct 18.
6
Light-induced gene expression with photocaged IPTG for induction profiling in a high-throughput screening system.在高通量筛选系统中,利用光笼化异丙基-β-D-硫代半乳糖苷进行光诱导基因表达以进行诱导分析。
Microb Cell Fact. 2016 Apr 23;15:63. doi: 10.1186/s12934-016-0461-3.
7
Synthesis of photocaged 6-O-(2-nitrobenzyl)guanosine and 4-O-(2-nitrobenzyl) uridine triphosphates for photocontrol of the RNA transcription reaction.用于光控RNA转录反应的光笼化6 - O -(2 - 硝基苄基)鸟苷三磷酸和4 - O -(2 - 硝基苄基)尿苷三磷酸的合成。
Bioorg Med Chem. 2017 Nov 1;25(21):6007-6015. doi: 10.1016/j.bmc.2017.09.032. Epub 2017 Sep 21.
8
A computational assessment of pH-dependent differential interaction of T7 lysozyme with T7 RNA polymerase.T7溶菌酶与T7 RNA聚合酶pH依赖性差异相互作用的计算评估
BMC Struct Biol. 2017 May 25;17(1):7. doi: 10.1186/s12900-017-0077-9.
9
The highly efficient T7 RNA polymerase: A wonder macromolecule in biological realm.高效的 T7 RNA 聚合酶:生物领域的神奇大分子。
Int J Biol Macromol. 2018 Oct 15;118(Pt A):49-56. doi: 10.1016/j.ijbiomac.2018.05.198. Epub 2018 May 27.
10
Transcription of DNA containing the 5-guanidino-4-nitroimidazole lesion by human RNA polymerase II and bacteriophage T7 RNA polymerase.含5-胍基-4-硝基咪唑损伤的DNA由人RNA聚合酶II和噬菌体T7 RNA聚合酶进行转录。
DNA Repair (Amst). 2008 Aug 2;7(8):1276-88. doi: 10.1016/j.dnarep.2008.04.007. Epub 2008 Jun 13.

引用本文的文献

1
Photocontrolling the Enantioselectivity of a Phosphotriesterase via Incorporation of a Light-Responsive Unnatural Amino Acid.通过引入光响应性非天然氨基酸对磷酸三酯酶的对映选择性进行光控。
JACS Au. 2025 Feb 5;5(2):858-870. doi: 10.1021/jacsau.4c01106. eCollection 2025 Feb 24.
2
Optogenetics with Atomic Precision─A Comprehensive Review of Optical Control of Protein Function through Genetic Code Expansion.具有原子精度的光遗传学——通过遗传密码扩展对蛋白质功能进行光学控制的全面综述
Chem Rev. 2025 Feb 26;125(4):1663-1717. doi: 10.1021/acs.chemrev.4c00224. Epub 2025 Feb 10.
3
Noncanonical Amino Acid Tools and Their Application to Membrane Protein Studies.非天然氨基酸工具及其在膜蛋白研究中的应用。
Chem Rev. 2024 Nov 27;124(22):12498-12550. doi: 10.1021/acs.chemrev.4c00181. Epub 2024 Nov 7.
4
Development of label-free light-controlled gene expression technologies using mid-IR and terahertz light.利用中红外和太赫兹光开发无标记光控基因表达技术。
Front Bioeng Biotechnol. 2024 Oct 11;12:1324757. doi: 10.3389/fbioe.2024.1324757. eCollection 2024.
5
Light-Activated Gene Expression System Using a Caging-Group-Free Photoactivatable Dye.使用无笼蔽基团光可激活染料的光激活基因表达系统。
Angew Chem Int Ed Engl. 2025 Jan 21;64(4):e202416420. doi: 10.1002/anie.202416420. Epub 2024 Nov 16.
6
Optogenetic Tools for Regulating RNA Metabolism and Functions.用于调控RNA代谢与功能的光遗传学工具。
Chembiochem. 2024 Dec 16;25(24):e202400615. doi: 10.1002/cbic.202400615. Epub 2024 Nov 4.
7
Cellular Site-Specific Incorporation of Noncanonical Amino Acids in Synthetic Biology.细胞特异性非天然氨基酸掺入的合成生物学。
Chem Rev. 2024 Sep 25;124(18):10577-10617. doi: 10.1021/acs.chemrev.3c00938. Epub 2024 Aug 29.
8
Noncanonical Amino Acids in Biocatalysis.非天然氨基酸在生物催化中的应用。
Chem Rev. 2024 Jul 24;124(14):8740-8786. doi: 10.1021/acs.chemrev.4c00120. Epub 2024 Jul 3.
9
Applications of genetic code expansion technology in eukaryotes.遗传密码扩展技术在真核生物中的应用。
Protein Cell. 2024 May 7;15(5):331-363. doi: 10.1093/procel/pwad051.
10
Recent Synthetic Biology Approaches for Temperature- and Light-Controlled Gene Expression in Bacterial Hosts.近期细菌宿主中温度和光控制基因表达的合成生物学方法。
Molecules. 2022 Oct 11;27(20):6798. doi: 10.3390/molecules27206798.

本文引用的文献

1
Principles and applications of the photochemical control of cellular processes.细胞过程光化学控制的原理与应用
Chembiochem. 2010 Jan 4;11(1):47-53. doi: 10.1002/cbic.200900529.
2
Light activation as a method of regulating and studying gene expression.光激活作为一种调节和研究基因表达的方法。
Curr Opin Chem Biol. 2009 Dec;13(5-6):678-86. doi: 10.1016/j.cbpa.2009.09.026. Epub 2009 Oct 24.
3
A light-activated DNA polymerase.一种光激活的DNA聚合酶。
Angew Chem Int Ed Engl. 2009;48(32):5950-3. doi: 10.1002/anie.200901115.
4
Light-activated Cre recombinase as a tool for the spatial and temporal control of gene function in mammalian cells.光激活型Cre重组酶作为一种用于时空控制哺乳动物细胞基因功能的工具。
ACS Chem Biol. 2009 Jun 19;4(6):441-5. doi: 10.1021/cb900041s.
5
Caged siRNAs for spatiotemporal control of gene silencing.用于基因沉默时空控制的笼状小干扰RNA
Mol Pharm. 2009 May-Jun;6(3):669-85. doi: 10.1021/mp900082q.
6
Illuminating the chemistry of life: design, synthesis, and applications of "caged" and related photoresponsive compounds.揭示生命化学:“笼形”及相关光响应化合物的设计、合成与应用
ACS Chem Biol. 2009 Jun 19;4(6):409-27. doi: 10.1021/cb900036s.
7
Light-activation of gene function in mammalian cells via ribozymes.通过核酶对哺乳动物细胞中的基因功能进行光激活。
Chem Commun (Camb). 2009 Feb 7(5):568-70. doi: 10.1039/b819375d. Epub 2008 Dec 2.
8
Improved synthesis of polyfluorinated L-lysine for 19F NMR-based screening.用于基于¹⁹F核磁共振筛选的多氟代L-赖氨酸的改进合成方法。
Mol Divers. 2009 Feb;13(1):53-6. doi: 10.1007/s11030-008-9097-5. Epub 2008 Nov 22.
9
Gene silencing in mammalian cells with light-activated antisense agents.利用光激活反义剂在哺乳动物细胞中实现基因沉默。
Chembiochem. 2008 Dec 15;9(18):2937-40. doi: 10.1002/cbic.200800627.
10
Photochemical activation of protein expression in bacterial cells.细菌细胞中蛋白质表达的光化学激活。
Angew Chem Int Ed Engl. 2007;46(23):4290-2. doi: 10.1002/anie.200700057.