• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

光敏组氨酸激酶的电子和蛋白结构动力学。

Electronic and protein structural dynamics of a photosensory histidine kinase.

机构信息

Biophysics Group, Department of Physics and Astronomy, Faculty of Sciences, VU University, Amsterdam, The Netherlands.

出版信息

Biochemistry. 2010 Jun 15;49(23):4752-9. doi: 10.1021/bi100527a.

DOI:10.1021/bi100527a
PMID:20459101
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2882989/
Abstract

The bacterium Caulobacter crescentus encodes a two-component signaling protein, LovK, that contains an N-terminal photosensory LOV domain coupled to a C-terminal histidine kinase. LovK binds a flavin cofactor, undergoes a reversible photocycle, and displays regulated ATPase and autophosphorylation activity in response to visible light. Femtosecond to nanosecond visible absorption spectroscopy demonstrates congruence between full-length LovK and isolated LOV domains in the mechanism and kinetics of light-dependent cysteinyl-C4(a) adduct formation and rupture, while steady-state absorption and fluorescence line narrowing (FLN) spectroscopies reveal unique features in the electronic structure of the LovK flavin cofactor. In agreement with other sensor histidine kinases, ATP binds specifically to LovK with micromolar affinity. However, ATP binding to the histidine kinase domain of LovK has no apparent effect on global protein structure as assessed by differential Fourier transform infrared (FTIR) spectroscopy. Cysteinyl adduct formation results in only minor changes in the structure of LovK as determined by differential FTIR. This study provides insight into the structural underpinnings of LOV-mediated signal transduction in the context of a full-length histidine kinase. In particular, the data provide evidence for a model in which small changes in the tertiary/quaternary structure of LovK, as triggered by photon detection in the N-terminal LOV sensory domain, are sufficient to regulate histidine kinase activity.

摘要

新月柄杆菌编码一种双组分信号蛋白,LovK,它包含一个 N 端光感受器 LOV 结构域和一个 C 端组氨酸激酶。LovK 结合黄素辅因子,经历可逆的光循环,并对可见光表现出调节的 ATP 酶和自磷酸化活性。飞秒到纳秒的可见吸收光谱证明全长 LovK 和分离的 LOV 结构域在光依赖性半胱氨酸 C4(a)加合物形成和断裂的机制和动力学方面是一致的,而稳态吸收和荧光线窄化(FLN)光谱揭示了 LovK 黄素辅因子电子结构的独特特征。与其他传感器组氨酸激酶一致,ATP 以微摩尔亲和力特异性结合 LovK。然而,ATP 结合到 LovK 的组氨酸激酶结构域对全局蛋白质结构没有明显影响,如差示傅里叶变换红外(FTIR)光谱所评估的那样。半胱氨酸加合物的形成导致 LovK 结构只有微小变化,如差示 FTIR 所确定的那样。这项研究提供了在全长组氨酸激酶背景下 LOV 介导的信号转导的结构基础的深入了解。特别是,数据提供了证据表明,由 N 端 LOV 感觉域中光子检测触发的 LovK 的三级/四级结构的微小变化足以调节组氨酸激酶活性。

相似文献

1
Electronic and protein structural dynamics of a photosensory histidine kinase.光敏组氨酸激酶的电子和蛋白结构动力学。
Biochemistry. 2010 Jun 15;49(23):4752-9. doi: 10.1021/bi100527a.
2
An analysis of the solution structure and signaling mechanism of LovK, a sensor histidine kinase integrating light and redox signals.LovK 是一种整合了光和氧化还原信号的传感器组氨酸激酶,对其溶液结构和信号机制进行分析。
Biochemistry. 2010 Aug 10;49(31):6761-70. doi: 10.1021/bi1006404.
3
A photosensory two-component system regulates bacterial cell attachment.一种光感受双组分系统调节细菌细胞附着。
Proc Natl Acad Sci U S A. 2007 Nov 13;104(46):18241-6. doi: 10.1073/pnas.0705887104. Epub 2007 Nov 6.
4
The LovK-LovR two-component system is a regulator of the general stress pathway in Caulobacter crescentus.该 LovK-LovR 双组分系统是新月柄杆菌总应激途径的调控因子。
J Bacteriol. 2012 Jun;194(12):3038-49. doi: 10.1128/JB.00182-12. Epub 2012 Mar 9.
5
The β-scaffold of the LOV domain of the Brucella light-activated histidine kinase is a key element for signal transduction.布鲁氏菌光激活组氨酸激酶 LOV 结构域的 β 支架是信号转导的关键元件。
J Mol Biol. 2012 Jun 29;420(1-2):112-27. doi: 10.1016/j.jmb.2012.04.006. Epub 2012 Apr 11.
6
Variation in LOV Photoreceptor Activation Dynamics Probed by Time-Resolved Infrared Spectroscopy.通过时间分辨红外光谱法探究LOV光感受器激活动力学的变化
Biochemistry. 2018 Feb 6;57(5):620-630. doi: 10.1021/acs.biochem.7b01040. Epub 2018 Jan 4.
7
The core dimerization domains of histidine kinases contain recognition specificity for the cognate response regulator.组氨酸激酶的核心二聚化结构域对同源应答调节因子具有识别特异性。
J Bacteriol. 2003 Aug;185(15):4424-31. doi: 10.1128/JB.185.15.4424-4431.2003.
8
A Single-Domain Response Regulator Functions as an Integrating Hub To Coordinate General Stress Response and Development in Alphaproteobacteria.一种单域应答调节子作为整合枢纽,协调α-变形菌的一般应激反应和发育。
mBio. 2018 May 22;9(3):e00809-18. doi: 10.1128/mBio.00809-18.
9
Regulation of the Erythrobacter litoralis DSM 8509 general stress response by visible light.可见光对海杆菌 DSM 8509 总应激反应的调控。
Mol Microbiol. 2019 Aug;112(2):442-460. doi: 10.1111/mmi.14310. Epub 2019 Jun 7.
10
Primary processes during the light-signal transduction of phototropin.向光素光信号转导过程中的初级过程。
Photochem Photobiol. 2007 Jan-Feb;83(1):122-30. doi: 10.1562/2006-03-29-RA-861.

引用本文的文献

1
Sub-Millisecond Photoinduced Dynamics of Free and EL222-Bound FMN by Stimulated Raman and Visible Absorption Spectroscopies.用受激拉曼和可见吸收光谱法研究自由态和与 EL222 结合态 FMN 的亚毫秒光诱导动力学。
Biomolecules. 2023 Jan 12;13(1):161. doi: 10.3390/biom13010161.
2
Class II LitR serves as an effector of "short" LOV-type blue-light photoreceptor in Pseudomonas mendocina.II 型光调控转录因子在门多萨假单胞菌中作为“短”LOV 型蓝光光受体的效应物。
Sci Rep. 2022 Dec 16;12(1):21765. doi: 10.1038/s41598-022-26254-3.
3
Dimer Asymmetry and Light Activation Mechanism in Blue-Light Sensor Histidine Kinase.

本文引用的文献

1
Spectro-temporal characterization of the photoactivation mechanism of two new oxidized cryptochrome/photolyase photoreceptors.两种新型氧化隐花色素/光解酶光受体光激活机制的光谱-时间特征。
J Am Chem Soc. 2010 Apr 7;132(13):4935-45. doi: 10.1021/ja1002372.
2
Interdomain signalling in the blue-light sensing and GTP-binding protein YtvA: a mutagenesis study uncovering the importance of specific protein sites.在蓝光感应和 GTP 结合蛋白 YtvA 中的域间信号传导:揭示特定蛋白质位点重要性的突变研究。
Photochem Photobiol Sci. 2010 Jan;9(1):47-56. doi: 10.1039/b9pp00075e. Epub 2009 Nov 30.
3
Blue light induces global and localized conformational changes in the kinase domain of full-length phototropin.
二聚体不对称性和蓝光传感器组氨酸激酶的光激活机制。
mBio. 2021 Apr 20;12(2):e00264-21. doi: 10.1128/mBio.00264-21.
4
Light Response of KT2440 Mediated by Class II LitR, a Photosensor Homolog.KT2440 由类 II LitR 介导的光响应,LitR 是一种光感受器同源物。
J Bacteriol. 2020 Sep 23;202(20). doi: 10.1128/JB.00146-20.
5
Helical Contributions Mediate Light-Activated Conformational Change in the LOV2 Domain of Phototropin 1.螺旋结构贡献介导光敏色素1的LOV2结构域中的光激活构象变化。
ACS Omega. 2019 Jan 15;4(1):1238-1243. doi: 10.1021/acsomega.8b02872. eCollection 2019 Jan 31.
6
Variation in LOV Photoreceptor Activation Dynamics Probed by Time-Resolved Infrared Spectroscopy.通过时间分辨红外光谱法探究LOV光感受器激活动力学的变化
Biochemistry. 2018 Feb 6;57(5):620-630. doi: 10.1021/acs.biochem.7b01040. Epub 2018 Jan 4.
7
Modulation of the flavin-protein interactions in NADH peroxidase and mercuric ion reductase: a resonance Raman study.NADH过氧化物酶和汞离子还原酶中黄素-蛋白质相互作用的调节:一项共振拉曼研究。
Eur Biophys J. 2018 Apr;47(3):205-223. doi: 10.1007/s00249-017-1245-3. Epub 2017 Sep 9.
8
Structural asymmetry in a conserved signaling system that regulates division, replication, and virulence of an intracellular pathogen.一种保守信号系统中的结构不对称性,该信号系统调节一种细胞内病原体的分裂、复制和毒力。
Proc Natl Acad Sci U S A. 2015 Jul 14;112(28):E3709-18. doi: 10.1073/pnas.1503118112. Epub 2015 Jun 29.
9
Variations in protein-flavin hydrogen bonding in a light, oxygen, voltage domain produce non-Arrhenius kinetics of adduct decay.在光、氧、电压结构域中,蛋白质-黄素氢键的变化导致加合物衰减的非阿仑尼乌斯动力学。
Biochemistry. 2011 Oct 18;50(41):8771-9. doi: 10.1021/bi200976a. Epub 2011 Sep 21.
10
Function, structure and mechanism of bacterial photosensory LOV proteins.细菌光敏 LOV 蛋白的功能、结构和机制。
Nat Rev Microbiol. 2011 Aug 8;9(10):713-23. doi: 10.1038/nrmicro2622.
蓝光诱导全长光受体激酶结构域发生全局和局域构象变化。
Biochemistry. 2010 Feb 9;49(5):1024-32. doi: 10.1021/bi9016044.
4
Influence of the LOV domain on low-lying excited states of flavin: a combined quantum-mechanics/molecular-mechanics investigation. LOV 结构域对黄素低激发态的影响:量子力学/分子力学的联合研究。
J Phys Chem B. 2009 Nov 26;113(47):15610-8. doi: 10.1021/jp905599k.
5
The role of key amino acids in the photoactivation pathway of the Synechocystis Slr1694 BLUF domain.关键氨基酸在集胞藻Synechocystis Slr1694蓝光感应结构域光激活途径中的作用
Biochemistry. 2009 Dec 8;48(48):11458-69. doi: 10.1021/bi901196x.
6
Mechanism-based tuning of a LOV domain photoreceptor.基于机制的 LOV 结构域光感受器的调谐。
Nat Chem Biol. 2009 Nov;5(11):827-34. doi: 10.1038/nchembio.210. Epub 2009 Aug 30.
7
Photophysical properties of structurally and electronically modified flavin derivatives determined by spectroscopy and theoretical calculations.通过光谱学和理论计算确定的结构和电子修饰的黄素衍生物的光物理性质。
J Phys Chem A. 2009 Aug 20;113(33):9365-75. doi: 10.1021/jp905724b.
8
Conformational heterogeneity and propagation of structural changes in the LOV2/Jalpha domain from Avena sativa phototropin 1 as recorded by temperature-dependent FTIR spectroscopy.通过温度依赖型傅里叶变换红外光谱记录的燕麦向光素1的LOV2/Jα结构域中的构象异质性和结构变化的传播。
Biophys J. 2009 Jul 8;97(1):238-47. doi: 10.1016/j.bpj.2009.03.047.
9
Primary reactions of the LOV2 domain of phototropin studied with ultrafast mid-infrared spectroscopy and quantum chemistry.用光超快中红外光谱和量子化学研究的向光素LOV2结构域的初级反应。
Biophys J. 2009 Jul 8;97(1):227-37. doi: 10.1016/j.bpj.2009.01.066.
10
Ultrafast transient absorption spectroscopy: principles and application to photosynthetic systems.超快瞬态吸收光谱学:原理及其在光合系统中的应用
Photosynth Res. 2009 Aug-Sep;101(2-3):105-18. doi: 10.1007/s11120-009-9454-y. Epub 2009 Jul 4.