Freiburg Center for Data Analysis and Modeling, University of Freiburg, Eckerstr. 1, D-79104 Freiburg, Germany.
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W118-23. doi: 10.1093/nar/gkq515. Epub 2010 Jun 6.
CCancer is an automatically collected database of gene lists, which were reported mostly by experimental studies in various biological and clinical contexts. At the moment, the database covers 3369 gene lists extracted from 2644 papers published in approximately 80 peer-reviewed journals. As input, CCancer accepts a gene list. An enrichment analyses is implemented to generate, as output, a highly informative survey over recently published studies that report gene lists, which significantly intersect with the query gene list. A report on gene pairs from the input list which were frequently reported together by other biological studies is also provided. CCancer is freely available at http://mips.helmholtz-muenchen.de/proj/ccancer.
CCancer 是一个基因列表的自动收集数据库，这些基因列表主要是通过各种生物和临床背景下的实验研究报告的。目前，该数据库涵盖了从大约 80 种同行评议期刊发表的 2644 篇论文中提取的 3369 个基因列表。作为输入，CCancer 接受一个基因列表。通过实施富集分析，生成一个高度信息丰富的调查，涵盖了最近发表的报告基因列表的研究，这些研究与查询基因列表有显著的交集。还提供了一份关于输入列表中基因对的报告，这些基因对经常被其他生物学研究一起报告。CCancer 可在 http://mips.helmholtz-muenchen.de/proj/ccancer 免费获得。
