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本文引用的文献

1
Squeezing a single polypeptide through a nanopore.将单个多肽挤过纳米孔。
Soft Matter. 2008 Apr 15;4(5):925-931. doi: 10.1039/b719850g.
2
PROBING SINGLE DNA MOLECULE TRANSPORT USING FABRICATED NANOPORES.利用人工制造的纳米孔探测单个DNA分子的转运
Nano Lett. 2004 Nov;4(11):2293-2298. doi: 10.1021/nl048654j.
3
Highly Sensitive, Mechanically Stable Nanopore Sensors for DNA Analysis.用于DNA分析的高灵敏度、机械稳定的纳米孔传感器。
Adv Mater. 2009 Jul 20;21(27):2771. doi: 10.1002/adma.200803786.
4
Nanopores in solid-state membranes engineered for single molecule detection.固态膜中的纳米孔,用于单分子检测。
Nanotechnology. 2010 Feb 10;21(6):065502. doi: 10.1088/0957-4484/21/6/065502. Epub 2010 Jan 11.
5
Nanopore with Transverse Nanoelectrodes for Electrical Characterization and Sequencing of DNA.用于DNA电学表征和测序的带有横向纳米电极的纳米孔
Sens Actuators B Chem. 2008 Jun 16;132(2):593-600. doi: 10.1016/j.snb.2007.11.054.
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Analyzing the forces binding a restriction endonuclease to DNA using a synthetic nanopore.使用合成纳米孔分析限制内切核酸酶与DNA结合的力。
Nucleic Acids Res. 2009 Jul;37(12):4170-9. doi: 10.1093/nar/gkp317. Epub 2009 May 11.
7
Reverse DNA translocation through a solid-state nanopore by magnetic tweezers.利用磁镊通过固态纳米孔进行DNA反向转位。
Nanotechnology. 2009 May 6;20(18):185101. doi: 10.1088/0957-4484/20/18/185101. Epub 2009 Apr 14.
8
Interrogating single proteins through nanopores: challenges and opportunities.通过纳米孔对单个蛋白质进行分析:挑战与机遇
Trends Biotechnol. 2009 Jun;27(6):333-41. doi: 10.1016/j.tibtech.2009.02.008. Epub 2009 Apr 23.
9
Single-nucleotide discrimination in immobilized DNA oligonucleotides with a biological nanopore.利用生物纳米孔对固定化DNA寡核苷酸进行单核苷酸识别。
Proc Natl Acad Sci U S A. 2009 May 12;106(19):7702-7. doi: 10.1073/pnas.0901054106. Epub 2009 Apr 20.
10
Continuous base identification for single-molecule nanopore DNA sequencing.单分子纳米孔DNA测序的连续碱基识别
Nat Nanotechnol. 2009 Apr;4(4):265-70. doi: 10.1038/nnano.2009.12. Epub 2009 Feb 22.

基于纳米孔的个体化医疗用分子诊断

Molecular diagnostics for personal medicine using a nanopore.

机构信息

Stinson-Remick Hall, University of Notre Dame, Notre Dame, IN 46556, USA.

出版信息

Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2010 Jul-Aug;2(4):367-81. doi: 10.1002/wnan.86.

DOI:10.1002/wnan.86
PMID:20564464
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5523111/
Abstract

Semiconductor nanotechnology has created the ultimate analytical tool: a nanopore with single molecule sensitivity. This tool offers the intriguing possibility of high-throughput, low cost sequencing of DNA with the absolute minimum of material and preprocessing. The exquisite single molecule sensitivity obviates the need for costly and error-prone procedures like polymerase chain reaction amplification. Instead, nanopore sequencing relies on the electric signal that develops when a DNA molecule translocates through a pore in a membrane. If each base pair has a characteristic electrical signature, then ostensibly a pore could be used to analyze the sequence by reporting all of the signatures in a single read without resorting to multiple DNA copies. The potential for a long read length combined with high translocation velocity should make resequencing inexpensive and allow for haplotyping and methylation profiling in a chromosome.

摘要

半导体纳米技术创造了终极分析工具

具有单分子灵敏度的纳米孔。该工具提供了一种极具吸引力的可能性,即可以使用绝对最少的材料和预处理,以高通量、低成本对 DNA 进行测序。这种精密的单分子灵敏度消除了对聚合酶链式反应 (PCR) 扩增等昂贵且易错的步骤的需求。相反,纳米孔测序依赖于 DNA 分子穿过膜上的孔时产生的电信号。如果每个碱基对都有一个特征电信号,那么显然可以通过在单个读取中报告所有的特征信号来分析序列,而无需使用多个 DNA 拷贝。长读取长度与高迁移速度的结合应该使重新测序变得廉价,并允许在染色体上进行单倍型和甲基化分析。