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中国血吸虫中间宿主钉螺 Oncomelania hupensis 和 Tricula hortensis 的线粒体基因组的保守性和变异性。

Conservation and variation in mitochondrial genomes of gastropods Oncomelania hupensis and Tricula hortensis, intermediate host snails of Schistosoma in China.

机构信息

Department of Parasitology, School of Basic Medical Science, Wuhan University, Wuhan, Hubei Province, China.

出版信息

Mol Phylogenet Evol. 2010 Oct;57(1):215-26. doi: 10.1016/j.ympev.2010.05.026. Epub 2010 Jun 2.

Abstract

The complete mitochondrial genomes of intermediate host snails for Schistosoma in China were sequenced, including the sub-species Oncomelania hupensis hupensis in two types, and O. hupensis robertsoni, intermediate hosts for S. japonicum, and Tricula hortensis, the intermediate host of S. sinensium. Four genomes have completely the same gene order as in other caenogastropods, containing 13 protein-coding genes and 22 transfer RNAs. The gene size, start codon and termination codon are mostly the same for all protein-coding genes. However, pairwise sequence alignments revealed quite different degrees of variation. The ribbed-shelled O. hupensis hupensis and the smooth-shelled but with varix O. hupensis hupensis had a lower level of genetic distance (3.1% for protein-coding genes), but the coden usages differed obviously in the mitochondrial genomes of these two types of snails, implying that their genetic difference may be larger than previously recognized. The mean genetic distance between O. hupensis hupensis and O. hupensis robertsoni was 12% for protein-coding genes, indicating a higher degree of genetic difference. In consideration of the difference in morphology and distribution, we considered that O. hupensis hupensis and O. hupensis robertsoni can be considered as separate species. The ribbed-shelled O. hupensishupensis and smooth-shelled O. hupensis robertsoni were phylogenetically clustered together within a same clade, which was then clustered with T. hortensis, confirming their close relationship. However, species or sub-species in the Oncomelania from southeastern Asian countries should be included in future study in order to resolve the phylogenetic relationship and origination of all snails in the genus.

摘要

中国中间宿主钉螺的完整线粒体基因组序列已被测序,包括两种类型的日本血吸虫中间宿主湖北钉螺亚种下的湖北钉螺指名亚种和曼氏血吸虫中间宿主福寿螺。这四个基因组与其他腹足纲动物完全相同的基因排列顺序,包含 13 个蛋白质编码基因和 22 个转移 RNA。大多数蛋白质编码基因的基因大小、起始密码子和终止密码子都相同。然而,成对序列比对显示出相当不同程度的变异。有肋壳的湖北钉螺指名亚种和光滑壳但有静脉的湖北钉螺指名亚种的遗传距离(蛋白质编码基因的 3.1%)较低,但这两种类型钉螺的线粒体基因组中的密码子使用明显不同,表明它们的遗传差异可能比以前认为的更大。湖北钉螺指名亚种和湖北钉螺罗伯逊亚种之间的平均遗传距离为蛋白质编码基因的 12%,表明遗传差异程度较高。考虑到形态和分布的差异,我们认为湖北钉螺指名亚种和湖北钉螺罗伯逊亚种可以被视为两个不同的物种。有肋壳的湖北钉螺指名亚种和光滑壳的湖北钉螺罗伯逊亚种在同一分支内聚类在一起,然后与福寿螺聚类在一起,证实了它们的密切关系。然而,来自东南亚国家的钉螺的种或亚种应在未来的研究中包括在内,以解决该属所有螺的系统发育关系和起源。

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