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Indoor fungal composition is geographically patterned and more diverse in temperate zones than in the tropics.室内真菌组成具有地理模式,在温带地区比在热带地区更为多样。
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2
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3
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本文引用的文献

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A method for detecting population genetic structure in diverse, high gene-flow species.一种用于检测基因流动频繁的多样物种的群体遗传结构的方法。
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Shifts in microbial community structure along an ecological gradient of hypersaline soils and sediments.沿高盐土壤和沉积物的生态梯度变化的微生物群落结构。
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General latitudinal gradient of biodiversity is reversed in ectomycorrhizal fungi.外生菌根真菌的生物多样性一般纬度梯度发生了逆转。
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Global distribution of cyanobacterial ecotypes in the cold biosphere.全球冷生环境中蓝藻的生态型分布。
ISME J. 2010 Feb;4(2):191-202. doi: 10.1038/ismej.2009.113. Epub 2009 Nov 5.
5
Potential link between plant and fungal distributions in a dipterocarp rainforest: community and phylogenetic structure of tropical ectomycorrhizal fungi across a plant and soil ecotone.潜在的热带雨林植物和真菌分布之间的联系:植物和土壤生态交错带热带外生菌根真菌的群落和系统发育结构。
New Phytol. 2010 Jan;185(2):529-42. doi: 10.1111/j.1469-8137.2009.03075.x. Epub 2009 Oct 29.
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Surface hydrophobin prevents immune recognition of airborne fungal spores.表面疏水蛋白可防止空气传播的真菌孢子被免疫识别。
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Accurate determination of microbial diversity from 454 pyrosequencing data.从454焦磷酸测序数据中准确测定微生物多样性。
Nat Methods. 2009 Sep;6(9):639-41. doi: 10.1038/nmeth.1361. Epub 2009 Aug 9.
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trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses.trimal:一种用于大规模系统发育分析中自动对齐修剪的工具。
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Multiple alignment of DNA sequences with MAFFT.使用MAFFT对DNA序列进行多重比对。
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FastTree: computing large minimum evolution trees with profiles instead of a distance matrix.FastTree:使用序列概况而非距离矩阵计算大型最小进化树。
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室内真菌组成具有地理模式,在温带地区比在热带地区更为多样。

Indoor fungal composition is geographically patterned and more diverse in temperate zones than in the tropics.

机构信息

Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720-3102, USA.

出版信息

Proc Natl Acad Sci U S A. 2010 Aug 3;107(31):13748-53. doi: 10.1073/pnas.1000454107. Epub 2010 Jun 28.

DOI:10.1073/pnas.1000454107
PMID:20616017
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2922287/
Abstract

Fungi are ubiquitous components of indoor human environments, where most contact between humans and microbes occurs. The majority of these organisms apparently play a neutral role, but some are detrimental to human lifestyles and health. Recent studies that used culture-independent sampling methods demonstrated a high diversity of indoor fungi distinct from that of outdoor environments. Others have shown temporal fluctuations of fungal assemblages in human environments and modest correlations with human activity, but global-scale patterns have not been examined, despite the manifest significance of biogeography in other microbial systems. Here we present a global survey of fungi from indoor environments (n = 72), using both taxonomic and phylogeny-informative molecular markers to determine whether global or local indoor factors determine indoor fungal composition. Contrary to common ecological patterns, we show that fungal diversity is significantly higher in temperate zones than in the tropics, with distance from the equator being the best predictor of phylogenetic community similarity. Fungal composition is significantly auto-correlated at the national and hemispheric spatial scales. Remarkably, building function has no significant effect on indoor fungal composition, despite stark contrasts between architecture and materials of some buildings in close proximity. Distribution of individual taxa is significantly range- and latitude-limited compared with a null model of randomized distribution. Our results suggest that factors driving fungal composition are primarily global rather than mediated by building design or function.

摘要

真菌是室内人类环境中无处不在的组成部分,人类与微生物的大多数接触都发生在这里。这些生物中的大多数显然起着中性的作用,但有些对人类的生活方式和健康有害。最近使用非培养采样方法的研究表明,室内真菌的多样性与室外环境明显不同。其他研究还表明,人类环境中的真菌组合存在时间波动,与人类活动有适度的相关性,但尚未研究全球尺度的模式,尽管生物地理学在其他微生物系统中具有明显的意义。在这里,我们使用分类和系统发育信息分子标记对来自室内环境的真菌进行了全球调查(n = 72),以确定全球或局部室内因素是否决定室内真菌组成。与常见的生态模式相反,我们表明,真菌多样性在温带地区明显高于热带地区,距离赤道越远,系统发育群落相似性的最佳预测因子。真菌组成在国家和半球空间尺度上呈显著自相关。值得注意的是,尽管一些建筑物在建筑和材料上存在明显差异,但建筑物的功能对室内真菌组成没有显著影响。与随机分布的零模型相比,个别分类群的分布明显受到范围和纬度的限制。我们的研究结果表明,驱动真菌组成的因素主要是全球性的,而不是由建筑设计或功能介导的。