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Diagnosis of west nile virus human infections: overview and proposal of diagnostic protocols considering the results of external quality assessment studies.西尼罗河病毒人类感染的诊断:综合考虑外部质量评估研究结果的诊断方案概述及建议。
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Vector Borne Zoonotic Dis. 2012 Oct;12(10):872-6. doi: 10.1089/vbz.2012.1008. Epub 2012 Jul 26.
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本文引用的文献

1
Baboon model for West Nile virus infection and vaccine evaluation.用于西尼罗河病毒感染和疫苗评估的狒狒模型。
Virology. 2006 Nov 10;355(1):44-51. doi: 10.1016/j.virol.2006.06.033. Epub 2006 Aug 10.
2
Comparison of commercially available and novel West Nile virus immunoassays for detection of seroconversion in pig-tailed macaques (Macaca nemestrina).用于检测食蟹猴(Macaca nemestrina)血清转化的市售和新型西尼罗河病毒免疫测定法的比较。
Comp Med. 2006 Feb;56(1):46-54.
3
Faster quantitative real-time PCR protocols may lose sensitivity and show increased variability.更快的定量实时PCR方案可能会降低灵敏度并显示出更高的变异性。
Nucleic Acids Res. 2005 Nov 27;33(21):e182. doi: 10.1093/nar/gni181.
4
Phylogenetic analysis of North American West Nile virus isolates, 2001-2004: evidence for the emergence of a dominant genotype.2001 - 2004年北美西尼罗河病毒分离株的系统发育分析:优势基因型出现的证据
Virology. 2005 Nov 25;342(2):252-65. doi: 10.1016/j.virol.2005.07.022. Epub 2005 Aug 31.
5
Methylene blue photoinactivation abolishes West Nile virus infectivity in vivo.亚甲蓝光灭活可消除西尼罗河病毒在体内的传染性。
Antiviral Res. 2005 Nov;68(2):84-7. doi: 10.1016/j.antiviral.2005.07.001. Epub 2005 Aug 9.
6
Epidemiology and transmission dynamics of West Nile virus disease.西尼罗河病毒病的流行病学与传播动力学
Emerg Infect Dis. 2005 Aug;11(8):1167-73. doi: 10.3201/eid1108.050289a.
7
Screening the blood supply for West Nile virus RNA by nucleic acid amplification testing.通过核酸扩增检测对血液供应进行西尼罗河病毒RNA筛查。
N Engl J Med. 2005 Aug 4;353(5):460-7. doi: 10.1056/NEJMoa044029.
8
West Nile virus among blood donors in the United States, 2003 and 2004.2003年和2004年美国献血者中的西尼罗河病毒
N Engl J Med. 2005 Aug 4;353(5):451-9. doi: 10.1056/NEJMoa044333.
9
Whole-genome transcription profiling of rhesus monkey rhadinovirus.恒河猴疱疹病毒的全基因组转录谱分析。
J Virol. 2005 Jul;79(13):8637-50. doi: 10.1128/JVI.79.13.8637-8650.2005.
10
West Nile virus infection after cardiac transplantation.心脏移植后感染西尼罗河病毒
J Heart Lung Transplant. 2005 Jun;24(6):774-6. doi: 10.1016/j.healun.2003.10.026.

全基因组实时 PCR 检测西尼罗河病毒可降低假阴性率并有助于发现新的病毒株。

Genome-wide real-time PCR for West Nile virus reduces the false-negative rate and facilitates new strain discovery.

机构信息

Department of Pathology, U. Oklahoma Health Sciences Center, 1100 N. Lindsay, Oklahoma City, OK 73104, United States.

出版信息

J Virol Methods. 2010 Oct;169(1):103-11. doi: 10.1016/j.jviromet.2010.07.005. Epub 2010 Jul 14.

DOI:10.1016/j.jviromet.2010.07.005
PMID:20637239
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3189403/
Abstract

West Nile virus (WNV) causes significant morbidity and mortality worldwide. Transplant and transfusion recipients as well as the elderly are particularly at risk. WNV shows strain variation from season to season and from locale to locale. This poses a significant problem for diagnosis. Most assays use a single primer pair to detect WNV by QPCR, and can fail to detect novel stains. To overcome this limitation, a genome-wide, multiple primer-based real-time QPCR assay was developed for WNV. The same assay can be used for quantitation, viral variant discovery as well as for amplification of the entire viral genome using a single annealing temperature. It improves upon routine diagnosis as well as facilitates laboratory investigations of the pathology of WNV.

摘要

西尼罗河病毒(WNV)在全球范围内造成了重大的发病率和死亡率。移植和输血受者以及老年人尤其处于危险之中。WNV 显示出季节性和地域性的毒株变异。这给诊断带来了重大问题。大多数检测方法使用单个引物对通过 QPCR 检测 WNV,并且可能无法检测到新型菌株。为了克服这一限制,开发了一种基于全基因组、多引物的实时 QPCR 检测方法用于检测 WNV。该检测方法可用于定量、病毒变异发现以及使用单一退火温度扩增整个病毒基因组。它提高了常规诊断的水平,并为研究 WNV 的病理学提供了便利。