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基于无标记 RNA 适体的电容式生物传感器用于检测 C 反应蛋白。

Label-free RNA aptamer-based capacitive biosensor for the detection of C-reactive protein.

机构信息

Faculty of Engineering and Natural Sciences, Sabanci University, Orhanli, Tuzla 34956, Istanbul, Turkey.

出版信息

Phys Chem Chem Phys. 2010 Aug 28;12(32):9176-82. doi: 10.1039/c004133e. Epub 2010 Jul 20.

DOI:10.1039/c004133e
PMID:20648264
Abstract

In this study, we report a novel aptamer-based capacitive label-free biosensor for monitoring transducing aptamer-protein recognition events, based on charge distribution under the applied frequency by non-Faradaic impedance spectroscopy (NFIS). This approach to capacitive biosensors is reported for the first time in this study, is reagent-less in processing and is developed using gold interdigitated (GID) capacitor arrays functionalized with synthetic RNA aptamers. The RNA atpamers served as biorecognition elements for C-reactive protein (CRP), a biomarker for cardiovascular disease risk (CVR). The signal is generated as a result of the change in relative capacitance occurring as a result of the formation of an RNA-CRP complex on GID capacitors with the applied AC electrical frequency (50-350 MHz). The dispersion peak of the capacitance curve was dependent on the CRP concentration and tends to shift toward lower frequencies, accompanied by the increase in relaxation time due to the increased size of the aptamer-CRP complex. The dissociation constant (K(d)) calculated from the non-linear regression analysis of the relative capacitance change with the applied frequency showed that strong binding of CRP occurred at 208 MHz (K(d) = 1.6 microM) followed by 150 MHz (K(d) = 4.2 microM) and 306 MHz (K(d) = 3.4 microM) frequencies. The dynamic detection range for CRP is determined to be within 100-500 pg ml(-1). Our results demonstrates the behavior of an RNA-protein complex on GID capacitors under an applied electric field, which can be extended to other pairs of affinity biomolecules as well as for the development of electrical biosensor systems for different applications, including the early diagnosis of diseases.

摘要

在这项研究中,我们报告了一种基于新型适体的电容无标记生物传感器,用于监测转导适体-蛋白识别事件,该传感器基于施加频率下的电荷分布通过非法拉第阻抗谱(NFIS)进行检测。这种基于电容的生物传感器方法在本研究中是首次报道,在处理过程中无需试剂,并使用金叉指(GID)电容器阵列进行开发,该阵列功能化有合成 RNA 适体。RNA 适体作为 C-反应蛋白(CRP)的生物识别元件,CRP 是心血管疾病风险(CVR)的生物标志物。该信号是由于在 GID 电容器上形成 RNA-CRP 复合物时相对电容发生变化而产生的,施加的交流电场频率为 50-350 MHz。电容曲线的弥散峰取决于 CRP 浓度,并倾向于向较低频率移动,同时由于适体-CRP 复合物的尺寸增加,弛豫时间也增加。通过对相对电容随施加频率的变化进行非线性回归分析计算出的解离常数(K(d))表明,CRP 在 208 MHz(K(d) = 1.6 microM)处发生强结合,随后在 150 MHz(K(d) = 4.2 microM)和 306 MHz(K(d) = 3.4 microM)处发生结合。CRP 的动态检测范围确定为 100-500 pg ml(-1) 以内。我们的结果表明,在施加电场下,GID 电容器上的 RNA-蛋白复合物的行为可以扩展到其他亲和生物分子对,以及用于开发用于不同应用的电生物传感器系统,包括疾病的早期诊断。

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