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定义 60S 核糖体亚基细胞质成熟途径。

Defining the pathway of cytoplasmic maturation of the 60S ribosomal subunit.

机构信息

Section of Molecular Genetics and Microbiology, University of Texas at Austin, Austin, TX 78712, USA.

出版信息

Mol Cell. 2010 Jul 30;39(2):196-208. doi: 10.1016/j.molcel.2010.06.018.

DOI:10.1016/j.molcel.2010.06.018
PMID:20670889
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2925414/
Abstract

In eukaryotic cells the final maturation of ribosomes occurs in the cytoplasm, where trans-acting factors are removed and critical ribosomal proteins are added for functionality. Here, we have carried out a comprehensive analysis of cytoplasmic maturation, ordering the known steps into a coherent pathway. Maturation is initiated by the ATPase Drg1. Downstream, assembly of the ribosome stalk is essential for the release of Tif6. The stalk recruits GTPases during translation. Because the GTPase Efl1, which is required for the release of Tif6, resembles the translation elongation factor eEF2, we suggest that assembly of the stalk recruits Efl1, triggering a step in 60S biogenesis that mimics aspects of translocation. Efl1 could thereby provide a mechanism to functionally check the nascent subunit. Finally, the release of Tif6 is a prerequisite for the release of the nuclear export adaptor Nmd3. Establishing this pathway provides an important conceptual framework for understanding ribosome maturation.

摘要

在真核细胞中,核糖体的最终成熟发生在细胞质中,在此过程中,反式作用因子被去除,并添加关键的核糖体蛋白以实现其功能。在这里,我们对细胞质成熟过程进行了全面分析,将已知的步骤有序地排列成一个连贯的途径。成熟过程由 ATP 酶 Drg1 启动。接下来,核糖体柄的组装对于 Tif6 的释放是必不可少的。该柄在翻译过程中招募 GTP 酶。由于释放 Tif6 所需的 GTP 酶 Efl1 类似于翻译延伸因子 eEF2,我们推测柄的组装会招募 Efl1,从而触发 60S 生物发生的一个步骤,该步骤模拟了转位的某些方面。Efl1 因此可以提供一种机制来对新生亚基进行功能检查。最后,Tif6 的释放是核输出适配器 Nmd3 释放的前提条件。建立这个途径为理解核糖体成熟过程提供了一个重要的概念框架。

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本文引用的文献

1
Characterization of the nuclear export adaptor protein Nmd3 in association with the 60S ribosomal subunit.与60S核糖体亚基相关的核输出衔接蛋白Nmd3的特性分析。
J Cell Biol. 2010 Jun 28;189(7):1079-86. doi: 10.1083/jcb.201001124.
2
Mechanism of eIF6-mediated inhibition of ribosomal subunit joining.eIF6 介导的核糖体亚基连接抑制机制。
J Biol Chem. 2010 May 14;285(20):14848-14851. doi: 10.1074/jbc.C109.096057. Epub 2010 Mar 31.
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Maturation of eukaryotic ribosomes: acquisition of functionality.真核核糖体的成熟:功能的获得。
Trends Biochem Sci. 2010 May;35(5):260-6. doi: 10.1016/j.tibs.2010.01.001.
4
The cytosolic J-protein, Jjj1, and Rei1 function in the removal of the pre-60 S subunit factor Arx1.细胞质 J 蛋白 Jjj1 和 Rei1 参与去除前 60 S 亚基因子 Arx1。
J Biol Chem. 2010 Jan 8;285(2):961-8. doi: 10.1074/jbc.M109.038349. Epub 2009 Nov 9.
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Driving ribosome assembly.驱动核糖体组装。
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Powering through ribosome assembly.助力核糖体组装。
RNA. 2009 Dec;15(12):2083-104. doi: 10.1261/rna.1792109. Epub 2009 Oct 22.
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The structure of the ribosome with elongation factor G trapped in the posttranslocational state.核糖体与延长因子 G 在易位后状态下的结构。
Science. 2009 Oct 30;326(5953):694-9. doi: 10.1126/science.1179709.
8
Yvh1 is required for a late maturation step in the 60S biogenesis pathway.Yvh1是60S核糖体生物合成途径中晚期成熟步骤所必需的。
J Cell Biol. 2009 Sep 21;186(6):863-80. doi: 10.1083/jcb.200904111.
9
Ribosome stalk assembly requires the dual-specificity phosphatase Yvh1 for the exchange of Mrt4 with P0.核糖体柄组装需要双特异性磷酸酶Yvh1来实现Mrt4与P0的交换。
J Cell Biol. 2009 Sep 21;186(6):849-62. doi: 10.1083/jcb.200904110.
10
Role and dynamics of the ribosomal protein P0 and its related trans-acting factor Mrt4 during ribosome assembly in Saccharomyces cerevisiae.核糖体蛋白 P0 及其相关反式作用因子 Mrt4 在酿酒酵母核糖体组装过程中的作用和动态。
Nucleic Acids Res. 2009 Dec;37(22):7519-32. doi: 10.1093/nar/gkp806.