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Pedobacter yonginense sp. nov.,从韩国一个中营养人工湖中分离得到。

Pedobacter yonginense sp. nov., isolated from a mesotrophic artificial Lake in Korea.

机构信息

Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Gyeonggi, Republic of Korea.

出版信息

J Microbiol. 2010 Aug;48(4):536-40. doi: 10.1007/s12275-010-0010-4. Epub 2010 Aug 20.

Abstract

A non-motile red-pigmented bacterium, designated strain HMD1002(T), was isolated from an artificial lake located on the campus of Hankuk University of Foreign Studies, South Korea. The major fatty acids were iso-C(15:0) (29.6%), Summed Feature 3 (comprising C(16:1) omega7c and/or iso-C(15:0) 2-OH; 17.5%) and iso-C(17:0) 3-OH (12.5%). The major isoprenoid quinone was menaquinone-7 (MK-7). The DNA G+C content was 41.0 mol%. A phylogenetic tree based on 16S rRNA gene sequences showed that strain HMD1002(T) formed a lineage in the genus Pedobacer and was closely related to Pedobacer terrae (96.3%) and Pedobacer suwonensis (95.8%) in sequence similarity. On the basis of the evidence presented in this study, strain HMD1002(T) represents a novel species of the genus Pedobacter, for which the name Pedobacter yonginense sp.nov. is proposed. The type strain is HMD1002(T) (=KCTC 22721(T) = CEC(T) 7544(T)).

摘要

一株非运动性红色着色细菌,命名为 HMD1002(T) 菌株,从韩国外国语大学校园内的一个人工湖中分离得到。主要脂肪酸为 iso-C(15:0)(29.6%)、Summed Feature 3(由 C(16:1)omega7c 和/或 iso-C(15:0)2-OH;17.5%)和 iso-C(17:0)3-OH(12.5%)组成。主要的异戊二烯醌是menaquinone-7(MK-7)。DNA G+C 含量为 41.0 mol%。基于 16S rRNA 基因序列构建的系统发育树显示,菌株 HMD1002(T)形成了 Pedobacter 属的一个分支,与 Pedobacer terrae(序列相似性为 96.3%)和 Pedobacer suwonensis(95.8%)密切相关。根据本研究提供的证据,菌株 HMD1002(T)代表了 Pedobacter 属的一个新种,命名为 Pedobacter yonginense sp.nov.。模式菌株为 HMD1002(T)=KCTC 22721(T)=CEC(T)7544(T)。

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