• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

黏着斑动力学的非平衡热力学和动力学。

The non-equilibrium thermodynamics and kinetics of focal adhesion dynamics.

机构信息

Department of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan, United States of America.

出版信息

PLoS One. 2010 Aug 18;5(8):e12043. doi: 10.1371/journal.pone.0012043.

DOI:10.1371/journal.pone.0012043
PMID:20805876
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2923603/
Abstract

BACKGROUND

We consider a focal adhesion to be made up of molecular complexes, each consisting of a ligand, an integrin molecule, and associated plaque proteins. Free energy changes drive the binding and unbinding of these complexes and thereby controls the focal adhesion's dynamic modes of growth, treadmilling and resorption.

PRINCIPAL FINDINGS

We have identified a competition among four thermodynamic driving forces for focal adhesion dynamics: (i) the work done during the addition of a single molecular complex of a certain size, (ii) the chemical free energy change associated with the addition of a molecular complex, (iii) the elastic free energy change associated with deformation of focal adhesions and the cell membrane, and (iv) the work done on a molecular conformational change. We have developed a theoretical treatment of focal adhesion dynamics as a nonlinear rate process governed by a classical kinetic model. We also express the rates as being driven by out-of-equilibrium thermodynamic driving forces, and modulated by kinetics. The mechanisms governed by the above four effects allow focal adhesions to exhibit a rich variety of behavior without the need to introduce special constitutive assumptions for their response. For the reaction-limited case growth, treadmilling and resorption are all predicted by a very simple chemo-mechanical model. Treadmilling requires symmetry breaking between the ends of the focal adhesion, and is achieved by driving force (i) above. In contrast, depending on its numerical value (ii) causes symmetric growth, resorption or is neutral, (iii) causes symmetric resorption, and (iv) causes symmetric growth. These findings hold for a range of conditions: temporally-constant force or stress, and for spatially-uniform and non-uniform stress distribution over the FA. The symmetric growth mode dominates for temporally-constant stress, with a reduced treadmilling regime.

SIGNIFICANCE

In addition to explaining focal adhesion dynamics, this treatment can be coupled with models of cytoskeleton dynamics and contribute to the understanding of cell motility.

摘要

背景

我们认为粘着斑由分子复合物组成,每个复合物由配体、整合素分子和相关斑蛋白组成。自由能变化驱动这些复合物的结合和解离,从而控制粘着斑的动态生长、 treadmilling 和吸收模式。

主要发现

我们已经确定了四种热力学驱动力在粘着斑动力学中的竞争:(i)添加一定大小的单个分子复合物所做的功,(ii)添加分子复合物相关的化学自由能变化,(iii)粘着斑和细胞膜变形相关的弹性能自由能变化,(iv)分子构象变化所做的功。我们已经开发了一种粘着斑动力学的理论处理方法,作为由经典动力学模型控制的非线性速率过程。我们还将速率表示为由非平衡热力学驱动力驱动,并由动力学调节。上述四种效应的机制允许粘着斑表现出丰富的行为,而无需对其响应引入特殊的本构假设。对于反应限制的生长、 treadmilling 和吸收,都可以通过一个非常简单的化学机械模型来预测。 treadmilling 需要粘着斑两端的对称性破坏,由驱动力(i)驱动。相比之下,取决于其数值(ii)导致对称生长、吸收或中性,(iii)导致对称吸收,(iv)导致对称生长。这些发现适用于一系列条件:时间恒定的力或应力,以及 FA 上空间均匀和非均匀的应力分布。对于时间恒定的应力,对称生长模式占主导地位, treadmilling 范围减小。

意义

除了解释粘着斑动力学外,这种处理方法还可以与细胞骨架动力学模型相结合,有助于理解细胞运动。

相似文献

1
The non-equilibrium thermodynamics and kinetics of focal adhesion dynamics.黏着斑动力学的非平衡热力学和动力学。
PLoS One. 2010 Aug 18;5(8):e12043. doi: 10.1371/journal.pone.0012043.
2
Focal adhesions as mechanosensors: a physical mechanism.作为机械传感器的粘着斑:一种物理机制。
Proc Natl Acad Sci U S A. 2005 Aug 30;102(35):12383-8. doi: 10.1073/pnas.0500254102. Epub 2005 Aug 19.
3
Assembly and mechanosensory function of focal adhesions: experiments and models.粘着斑的组装及机械感受功能:实验与模型
Eur J Cell Biol. 2006 Apr;85(3-4):165-73. doi: 10.1016/j.ejcb.2005.11.001. Epub 2005 Dec 19.
4
A Chemomechanical Model of Matrix and Nuclear Rigidity Regulation of Focal Adhesion Size.粘着斑大小的基质和核刚性调节的化学机械模型。
Biophys J. 2015 Nov 3;109(9):1807-17. doi: 10.1016/j.bpj.2015.08.048.
5
A computational study of stress fiber-focal adhesion dynamics governing cell contractility.一项关于调控细胞收缩性的应力纤维-黏着斑动力学的计算研究。
Biophys J. 2014 May 6;106(9):1890-901. doi: 10.1016/j.bpj.2014.03.027.
6
Mechanical forces alter zyxin unbinding kinetics within focal adhesions of living cells.机械力改变活细胞粘着斑内斑联蛋白的解离动力学。
J Cell Physiol. 2006 Apr;207(1):187-94. doi: 10.1002/jcp.20550.
7
Force-driven aggregation of specific bonds on compliant substrates.在顺应性基底上受迫驱动特定键的聚集。
J Biomech. 2013 Jul 26;46(11):1961-6. doi: 10.1016/j.jbiomech.2013.05.004. Epub 2013 Jun 10.
8
Cell mechanosensitivity controls the anisotropy of focal adhesions.细胞机械敏感性控制着黏着斑的各向异性。
Proc Natl Acad Sci U S A. 2004 Aug 24;101(34):12520-5. doi: 10.1073/pnas.0403539101. Epub 2004 Aug 16.
9
Stabilizing to disruptive transition of focal adhesion response to mechanical forces.稳定黏着斑反应对机械力的破坏性转变。
J Biomech. 2010 Sep 17;43(13):2524-9. doi: 10.1016/j.jbiomech.2010.05.019. Epub 2010 Jun 9.
10
Pre-strains and buckling in mechanosensitivity of contractile cells and focal adhesions: A tensegrity model.预应变和收缩细胞及黏着斑的机械敏感性中的屈曲:张紧整体模型。
J Mech Behav Biomed Mater. 2022 Nov;135:105413. doi: 10.1016/j.jmbbm.2022.105413. Epub 2022 Aug 20.

引用本文的文献

1
A continuum mechanical model of cell motion driven by a biphasic traction stress.由双相牵引力驱动的细胞运动的连续体力学模型。
J R Soc Interface. 2024 Jan;21(210):20230543. doi: 10.1098/rsif.2023.0543. Epub 2024 Jan 17.
2
Cells on Hydrogels with Micron-Scaled Stiffness Patterns Demonstrate Local Stiffness Sensing.具有微米级刚度模式的水凝胶上的细胞表现出局部刚度感知。
Nanomaterials (Basel). 2022 Feb 15;12(4):648. doi: 10.3390/nano12040648.
3
The bioenergetics of integrin-based adhesion, from single molecule dynamics to stability of macromolecular complexes.

本文引用的文献

1
Demonstration of catch bonds between an integrin and its ligand.整合素与其配体之间捕获键的证明。
J Cell Biol. 2009 Jun 29;185(7):1275-84. doi: 10.1083/jcb.200810002.
2
Characterizing the resistance generated by a molecular bond as it is forcibly separated.表征分子键在被强行分离时产生的阻力。
Proc Natl Acad Sci U S A. 2009 Jun 2;106(22):8818-23. doi: 10.1073/pnas.0903003106. Epub 2009 Apr 29.
3
Optimum size of a molecular bond cluster in adhesion.粘附过程中分子键簇的最佳尺寸
基于整合素的黏附的生物能量学,从单分子动力学到大分子复合物的稳定性
Comput Struct Biotechnol J. 2020 Feb 13;18:393-416. doi: 10.1016/j.csbj.2020.02.003. eCollection 2020.
4
Dynamics of Mechanosensitive Nascent Adhesion Formation.力敏性新生黏附形成的动力学。
Biophys J. 2019 Sep 17;117(6):1057-1073. doi: 10.1016/j.bpj.2019.08.004. Epub 2019 Aug 12.
5
Center or periphery? Modeling the effects of focal adhesion placement during cell spreading.中心还是周边?模拟细胞铺展过程中粘着斑位置的影响。
PLoS One. 2017 Feb 3;12(2):e0171430. doi: 10.1371/journal.pone.0171430. eCollection 2017.
6
A computational study of stress fiber-focal adhesion dynamics governing cell contractility.一项关于调控细胞收缩性的应力纤维-黏着斑动力学的计算研究。
Biophys J. 2014 May 6;106(9):1890-901. doi: 10.1016/j.bpj.2014.03.027.
7
A kinetic model for RNA-interference of focal adhesions.一种用于粘着斑RNA干扰的动力学模型。
BMC Syst Biol. 2013 Jan 12;7:2. doi: 10.1186/1752-0509-7-2.
8
Nucleation and decay initiation are the stiffness-sensitive phases of focal adhesion maturation.成核和衰减起始是黏着斑成熟的刚度敏感相。
Biophys J. 2011 Dec 21;101(12):2919-28. doi: 10.1016/j.bpj.2011.11.010. Epub 2011 Dec 20.
9
Cell-biomaterial mechanical interaction in the framework of tissue engineering: insights, computational modeling and perspectives.组织工程框架下的细胞-生物材料力学相互作用:见解、计算建模与展望
Int J Mol Sci. 2011;12(11):8217-44. doi: 10.3390/ijms12118217. Epub 2011 Nov 21.
10
Perspectives on biological growth and remodeling.关于生物生长与重塑的观点。
J Mech Phys Solids. 2011 Apr 1;59(4):863-883. doi: 10.1016/j.jmps.2010.12.011.
Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Aug;78(2 Pt 1):021909. doi: 10.1103/PhysRevE.78.021909. Epub 2008 Aug 19.
4
Dynamics of cellular focal adhesions on deformable substrates: consequences for cell force microscopy.可变形基质上细胞粘着斑的动力学:对细胞力显微镜的影响
Biophys J. 2008 Jul;95(2):527-39. doi: 10.1529/biophysj.107.127399. Epub 2008 Apr 11.
5
Lifetime and strength of adhesive molecular bond clusters between elastic media.弹性介质之间粘性分子键簇的寿命与强度
Langmuir. 2008 Feb 19;24(4):1262-70. doi: 10.1021/la702401b. Epub 2008 Jan 8.
6
Force-induced activation of talin and its possible role in focal adhesion mechanotransduction.力诱导的踝蛋白激活及其在粘着斑机械转导中的可能作用。
J Biomech. 2007;40(9):2096-106. doi: 10.1016/j.jbiomech.2007.04.006.
7
Adhesion-mediated mechanosensitivity: a time to experiment, and a time to theorize.黏附介导的机械敏感性:实验之时,理论之期。
Curr Opin Cell Biol. 2006 Oct;18(5):472-81. doi: 10.1016/j.ceb.2006.08.012. Epub 2006 Aug 22.
8
Limitation of cell adhesion by the elasticity of the extracellular matrix.细胞外基质弹性对细胞黏附的限制
Biophys J. 2006 Jul 1;91(1):61-73. doi: 10.1529/biophysj.105.077115. Epub 2006 Mar 31.
9
Force-induced adsorption and anisotropic growth of focal adhesions.力诱导的粘着斑吸附与各向异性生长。
Biophys J. 2006 May 15;90(10):3469-84. doi: 10.1529/biophysj.105.074377. Epub 2006 Mar 2.
10
Mechanical forces alter zyxin unbinding kinetics within focal adhesions of living cells.机械力改变活细胞粘着斑内斑联蛋白的解离动力学。
J Cell Physiol. 2006 Apr;207(1):187-94. doi: 10.1002/jcp.20550.