Laboratorio de Virología, Instituto Nacional de Salud, Avenida/Calle 26 No, Bogotá D.C., Colombia.
Virol J. 2010 Sep 14;7:226. doi: 10.1186/1743-422X-7-226.
Dengue Fever is one of the most important viral re-emergent diseases affecting about 50 million people around the world especially in tropical and sub-tropical countries. In Colombia, the virus was first detected in the earliest 70's when the disease became a major public health concern. Since then, all four serotypes of the virus have been reported. Although most of the huge outbreaks reported in this country have involved dengue virus serotype 1 (DENV-1), there are not studies about its origin, genetic diversity and distribution.
We used 224 bp corresponding to the carboxyl terminus of envelope (E) gene from 74 Colombian isolates in order to reconstruct phylogenetic relationships and to estimate time divergences. Analyzed DENV-1 Colombian isolates belonged to the formerly defined genotype V. Only one virus isolate was clasified in the genotype I, likely representing a sole introduction that did not spread. The oldest strains were closely related to those detected for the first time in America in 1977 from the Caribbean and were detected for two years until their disappearance about six years later. Around 1987, a split up generated 2 lineages that have been evolving separately, although not major amino acid changes in the analyzed region were found.
DENV-1 has been circulating since 1978 in Colombia. Yet, the phylogenetic relationships between strains isolated along the covered period of time suggests that viral strains detected in some years, although belonging to the same genotype V, have different recent origins corresponding to multiple re-introduction events of viral strains that were circulating in neighbor countries. Viral strains used in the present study did not form a monophyletic group, which is evidence of a polyphyletic origin. We report the rapid spread patterns and high evolution rate of the different DENV-1 lineages.
登革热是影响全球约 5000 万人的最重要的病毒性再发疾病之一,尤其是在热带和亚热带国家。在哥伦比亚,该病毒于 70 年代初首次被发现,当时该病成为主要的公共卫生问题。从那时起,已报告了该病毒的所有四个血清型。尽管该国报告的大多数大规模暴发都涉及登革热病毒血清型 1(DENV-1),但尚无关于其起源,遗传多样性和分布的研究。
我们使用了 74 个哥伦比亚分离株的羧基末端包膜(E)基因的 224bp,以重建系统发育关系并估计时间分歧。分析的 DENV-1 哥伦比亚分离株属于以前定义的基因型 V。只有一个病毒分离株被分类为基因型 I,可能代表唯一的传入而没有传播。最古老的菌株与 1977 年首次在美洲从加勒比地区检测到的菌株密切相关,并且在两年内被检测到,直到大约六年后消失。大约在 1987 年,一次分裂产生了两个单独进化的谱系,尽管在分析区域中未发现主要的氨基酸变化。
DENV-1 自 1978 年以来一直在哥伦比亚传播。然而,在所涵盖的时间段内分离出的菌株的系统发育关系表明,在某些年份检测到的菌株虽然属于同一基因型 V,但具有不同的最近起源,这与在邻国传播的病毒株的多次再引入事件相对应。在本研究中使用的病毒株未形成单系群,这表明其起源具有多系性。我们报告了不同 DENV-1 谱系的快速传播模式和高进化率。