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细菌鞭毛的力-伸长曲线。

Force-extension curves of bacterial flagella.

作者信息

Vogel R, Stark H

机构信息

Institute for Theoretical Physics, TU Berlin, Germany.

出版信息

Eur Phys J E Soft Matter. 2010 Nov;33(3):259-71. doi: 10.1140/epje/i2010-10664-5. Epub 2010 Nov 4.

DOI:10.1140/epje/i2010-10664-5
PMID:21046183
Abstract

Bacterial flagella assume different helical shapes during the tumbling phase of a bacterium but also in response to varying environmental conditions. Force-extension measurements by Darnton and Berg explicitly demonstrate a transformation from the coiled to the normal helical state (N.C. Darnton, H.C. Berg, Biophys. J. 92, 2230 (2007)). We here develop an elastic model for the flagellum based on Kirchhoff's theory of an elastic rod that describes such a polymorphic transformation and use resistive force theory to couple the flagellum to the aqueous environment. We present Brownian-dynamics simulations that quantitatively reproduce the force-extension curves and study how the ratio Γ of torsional to bending rigidity and the extensional rate influence the response of the flagellum. An upper bound for Γ is given. Using clamped flagella, we show in an adiabatic approximation that the mean extension, where a local coiled-to-normal transition occurs first, depends on the logarithm of the extensional rate.

摘要

细菌鞭毛在细菌翻滚阶段以及对不同环境条件的响应中呈现出不同的螺旋形状。达恩顿和伯格进行的力-伸长测量明确表明了从盘绕状态到正常螺旋状态的转变(N.C. 达恩顿、H.C. 伯格,《生物物理杂志》92卷,2230页(2007年))。我们在此基于基尔霍夫弹性杆理论为鞭毛建立一个弹性模型,该模型描述了这种多态转变,并使用阻力理论将鞭毛与水环境耦合。我们展示了布朗动力学模拟,其定量地再现了力-伸长曲线,并研究了扭转刚度与弯曲刚度的比率Γ以及伸长率如何影响鞭毛的响应。给出了Γ的上限。使用固定的鞭毛,我们在绝热近似中表明,首先发生局部盘绕到正常转变的平均伸长取决于伸长率的对数。

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The elastic basis for the shape of Borrelia burgdorferi.伯氏疏螺旋体形态的弹性基础。
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The effect of long-range hydrodynamic interaction on the swimming of a single bacterium.长程流体动力相互作用对单个细菌游动的影响。
Biophys J. 2009 Mar 4;96(5):2023-8. doi: 10.1016/j.bpj.2008.11.046.
3
Microfluidic pump powered by self-organizing bacteria.由自组织细菌驱动的微流控泵。
Micromachines (Basel). 2019 Jul 4;10(7):449. doi: 10.3390/mi10070449.
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The swimming of a deforming helix.一个变形螺旋的游动。
Eur Phys J E Soft Matter. 2018 Oct 11;41(10):119. doi: 10.1140/epje/i2018-11728-2.
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A polar bundle of flagella can drive bacterial swimming by pushing, pulling, or coiling around the cell body.一个极性鞭毛束可以通过推动、拉动或缠绕细胞体来驱动细菌游动。
Sci Rep. 2017 Dec 1;7(1):16771. doi: 10.1038/s41598-017-16428-9.
6
Modeling polymorphic transformation of rotating bacterial flagella in a viscous fluid.在粘性流体中旋转细菌鞭毛的多晶型转变建模。
Phys Rev E. 2017 Jun;95(6-1):063106. doi: 10.1103/PhysRevE.95.063106. Epub 2017 Jun 14.
7
Bacteria exploit a polymorphic instability of the flagellar filament to escape from traps.细菌利用鞭毛丝的多态不稳定性来逃避陷阱。
Proc Natl Acad Sci U S A. 2017 Jun 13;114(24):6340-6345. doi: 10.1073/pnas.1701644114. Epub 2017 May 30.
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Physical Sensing of Surface Properties by Microswimmers--Directing Bacterial Motion via Wall Slip.微游动器对表面性质的物理感知——通过壁面滑移引导细菌运动。
Sci Rep. 2015 May 20;5:9586. doi: 10.1038/srep09586.
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Collective navigation of cargo-carrying swarms.群体式货物运载群集导航。
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6
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7
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