• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

痢疾志贺氏菌 Spa15 在溶液中的双电子电子顺磁共振结构验证。

Shigella flexneri Spa15 crystal structure verified in solution by double electron electron resonance.

机构信息

Inorganic Chemistry Laboratory, University of Oxford, OX1 3QR, UK.

出版信息

J Mol Biol. 2011 Jan 14;405(2):427-35. doi: 10.1016/j.jmb.2010.10.053. Epub 2010 Nov 12.

DOI:10.1016/j.jmb.2010.10.053
PMID:21075116
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3021122/
Abstract

Shigella flexneri Spa15 is a chaperone of the type 3 secretion system, which binds a number of effectors to ensure their stabilization prior to secretion. One of these effectors is IpgB1, a mimic of the human Ras-like Rho guanosine triphosphatase RhoG. In this study, Spa15 alone and in complex with IpgB1 has been studied by double electron electron resonance, an experiment that gives distance information showing the spacial separation of attached spin labels. This distance is explained by determining the crystal structure of the spin-labeled Spa15 where labels are seen to be buried in hydrophobic pockets. The double electron electron resonance experiment on the Spa15 complex with IpgB1 shows that IpgB1 does not bind Spa15 in the same way as is seen in the homologous Salmonella sp. chaperone:effector complex InvB:SipA.

摘要

福氏志贺氏菌 Spa15 是 III 型分泌系统的伴侣蛋白,可结合多种效应蛋白,以确保在分泌前稳定这些效应蛋白。其中一种效应蛋白是 IpgB1,它模拟人类 Ras 样 Rho 鸟苷三磷酸酶 RhoG。在这项研究中,我们通过双电子电子共振实验单独研究了 Spa15 及其与 IpgB1 的复合物,该实验提供了距离信息,显示了附着的自旋标记物之间的空间分离。通过确定自旋标记 Spa15 的晶体结构来解释这种距离,在该结构中,可以看到标记物埋藏在疏水性口袋中。对 Spa15 与 IpgB1 复合物的双电子电子共振实验表明,IpgB1 与 Spa15 的结合方式与在同源性沙门氏菌属 chaperone:effector 复合物 InvB:SipA 中观察到的方式不同。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8eb0/3021122/75dcfddf5866/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8eb0/3021122/311bac0d5e4a/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8eb0/3021122/87bb2fec18a7/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8eb0/3021122/86f38eef02ff/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8eb0/3021122/75dcfddf5866/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8eb0/3021122/311bac0d5e4a/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8eb0/3021122/87bb2fec18a7/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8eb0/3021122/86f38eef02ff/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8eb0/3021122/75dcfddf5866/gr3.jpg

相似文献

1
Shigella flexneri Spa15 crystal structure verified in solution by double electron electron resonance.痢疾志贺氏菌 Spa15 在溶液中的双电子电子顺磁共振结构验证。
J Mol Biol. 2011 Jan 14;405(2):427-35. doi: 10.1016/j.jmb.2010.10.053. Epub 2010 Nov 12.
2
A multifunctional region of the Shigella type 3 effector IpgB1 is important for secretion from bacteria and membrane targeting in eukaryotic cells.志贺氏菌 3 型效应蛋白 IpgB1 的多功能区域对于细菌的分泌和真核细胞中的膜靶向都很重要。
PLoS One. 2014 Apr 9;9(4):e93461. doi: 10.1371/journal.pone.0093461. eCollection 2014.
3
Structure of Spa15, a type III secretion chaperone from Shigella flexneri with broad specificity.宋内志贺菌III型分泌分子伴侣Spa15的结构,具有广泛特异性。
EMBO Rep. 2004 May;5(5):477-83. doi: 10.1038/sj.embor.7400144. Epub 2004 Apr 16.
4
Spa15 of Shigella flexneri, a third type of chaperone in the type III secretion pathway.福氏志贺菌的Spa15,III型分泌途径中的第三种伴侣蛋白。
Mol Microbiol. 2002 Mar;43(6):1533-42. doi: 10.1046/j.1365-2958.2002.02835.x.
5
IpgB1 and IpgB2, two homologous effectors secreted via the Mxi-Spa type III secretion apparatus, cooperate to mediate polarized cell invasion and inflammatory potential of Shigella flexenri.IpgB1和IpgB2是通过Mxi-Spa III型分泌系统分泌的两种同源效应蛋白,它们协同介导弗氏志贺菌的极化细胞侵袭和炎症潜能。
Microbes Infect. 2008 Mar;10(3):260-8. doi: 10.1016/j.micinf.2007.11.011. Epub 2007 Dec 8.
6
Spa15 of Shigella flexneri is secreted through the type III secretion system and prevents staurosporine-induced apoptosis.福氏志贺菌的Spa15通过III型分泌系统分泌,并可防止星形孢菌素诱导的细胞凋亡。
Infect Immun. 2009 Dec;77(12):5281-90. doi: 10.1128/IAI.00800-09. Epub 2009 Oct 5.
7
A secreted anti-activator, OspD1, and its chaperone, Spa15, are involved in the control of transcription by the type III secretion apparatus activity in Shigella flexneri.一种分泌型抗激活因子OspD1及其伴侣蛋白Spa15参与了福氏志贺菌中III型分泌系统活性对转录的调控。
Mol Microbiol. 2005 Jun;56(6):1627-35. doi: 10.1111/j.1365-2958.2005.04645.x.
8
The type three secretion system effector protein IpgB1 promotes Shigella flexneri cell-to-cell spread through double-membrane vacuole escape.III 型分泌系统效应蛋白 IpgB1 通过逃离双层膜囊泡促进福氏志贺菌细胞间扩散。
PLoS Pathog. 2022 Feb 24;18(2):e1010380. doi: 10.1371/journal.ppat.1010380. eCollection 2022 Feb.
9
IpaB-IpgC interaction defines binding motif for type III secretion translocator.IpaB与IpgC的相互作用确定了III型分泌转运体的结合基序。
Proc Natl Acad Sci U S A. 2009 Jun 16;106(24):9661-6. doi: 10.1073/pnas.0812900106. Epub 2009 May 28.
10
Combination of two separate binding domains defines stoichiometry between type III secretion system chaperone IpgC and translocator protein IpaB.两个独立结合域的组合定义了 III 型分泌系统伴侣蛋白 IpgC 和转位蛋白 IpaB 之间的化学计量关系。
J Biol Chem. 2010 Dec 17;285(51):39965-75. doi: 10.1074/jbc.M110.135616. Epub 2010 Oct 11.

引用本文的文献

1
Protein Modeling with DEER Spectroscopy.利用双电子-电子共振光谱进行蛋白质建模。
Annu Rev Biophys. 2025 May;54(1):35-57. doi: 10.1146/annurev-biophys-030524-013431. Epub 2024 Dec 17.
2
Cross-validation of distance measurements in proteins by PELDOR/DEER and single-molecule FRET.通过 PELDOR/DEER 和单分子 FRET 对蛋白质中的距离测量进行交叉验证。
Nat Commun. 2022 Jul 29;13(1):4396. doi: 10.1038/s41467-022-31945-6.
3
Benchmark Test and Guidelines for DEER/PELDOR Experiments on Nitroxide-Labeled Biomolecules.用于氮氧自由基标记生物分子的 DEER/PELDOR 实验的基准测试和指南。

本文引用的文献

1
Determination of End-to-End Distances in a Series of TEMPO Diradicals of up to 2.8 nm Length with a New Four-Pulse Double Electron Electron Resonance Experiment.利用新型四脉冲双电子电子共振实验测定长度达2.8纳米的一系列TEMPO双自由基的端到端距离
Angew Chem Int Ed Engl. 1998 Nov 2;37(20):2833-2837. doi: 10.1002/(SICI)1521-3773(19981102)37:20<2833::AID-ANIE2833>3.0.CO;2-7.
2
Flexibility of shape-persistent molecular building blocks composed of p-phenylene and ethynylene units.由对苯二酚和乙炔基单元组成的形状保持分子砌块的灵活性。
J Am Chem Soc. 2010 Jul 28;132(29):10107-17. doi: 10.1021/ja102983b.
3
Timing is everything: the regulation of type III secretion.
J Am Chem Soc. 2021 Nov 3;143(43):17875-17890. doi: 10.1021/jacs.1c07371. Epub 2021 Oct 19.
4
PELDOR/DEER: An Electron Paramagnetic Resonance Method to Study Membrane Proteins in Lipid Bilayers.PELDOR/DEER:一种用于研究脂质双层中膜蛋白的电子顺磁共振方法。
Methods Mol Biol. 2020;2168:313-333. doi: 10.1007/978-1-0716-0724-4_15.
5
Steps for Shigella Gatekeeper Protein MxiC Function in Hierarchical Type III Secretion Regulation.志贺氏菌守门蛋白MxiC在分层III型分泌调节中的功能步骤
J Biol Chem. 2017 Feb 3;292(5):1705-1723. doi: 10.1074/jbc.M116.746826. Epub 2016 Dec 14.
6
The use of the Rx spin label in orientation measurement on proteins, by EPR.通过电子顺磁共振(EPR)使用Rx自旋标记对蛋白质进行取向测量。
Phys Chem Chem Phys. 2016 Feb 17;18(8):5799-806. doi: 10.1039/c5cp04753f.
7
Modeling of the N-terminal Section and the Lumenal Loop of Trimeric Light Harvesting Complex II (LHCII) by Using EPR.利用电子顺磁共振对三聚体光系统II捕光复合体(LHCII)的N端区域和腔内环进行建模。
J Biol Chem. 2015 Oct 23;290(43):26007-20. doi: 10.1074/jbc.M115.669804. Epub 2015 Aug 27.
8
High-resolution crystal structure of spin labelled (T21R1) azurin from Pseudomonas aeruginosa: a challenging structural benchmark for in silico spin labelling algorithms.铜绿假单胞菌自旋标记(T21R1)天青蛋白的高分辨率晶体结构:计算机自旋标记算法的一个具有挑战性的结构基准。
BMC Struct Biol. 2014 May 29;14:16. doi: 10.1186/1472-6807-14-16.
9
Perturbations of the straight transmembrane α-helical structure of the amyloid precursor protein affect its processing by γ-secretase.淀粉样前体蛋白的直跨膜 α-螺旋结构的扰动会影响其被 γ-分泌酶的加工。
J Biol Chem. 2014 Mar 7;289(10):6763-6774. doi: 10.1074/jbc.M113.470781. Epub 2014 Jan 27.
10
Type III chaperones & Co in bacterial plant pathogens: a set of specialized bodyguards mediating effector delivery.III 型分子伴侣及相关因子在植物病原菌中的作用:一类介导效应子传递的专业化“保镖”。
Front Plant Sci. 2013 Nov 22;4:435. doi: 10.3389/fpls.2013.00435.
时机就是一切:III 型分泌系统的调控。
Cell Mol Life Sci. 2010 Apr;67(7):1065-75. doi: 10.1007/s00018-009-0230-0. Epub 2009 Dec 31.
4
Structural insights into host GTPase isoform selection by a family of bacterial GEF mimics.细菌GEF模拟物家族对宿主GTPase亚型选择的结构见解。
Nat Struct Mol Biol. 2009 Aug;16(8):853-60. doi: 10.1038/nsmb.1647. Epub 2009 Jul 20.
5
Protein interaction platforms: visualization of interacting proteins in yeast.蛋白质相互作用平台:酵母中相互作用蛋白质的可视化
Nat Methods. 2009 Jul;6(7):500-2. doi: 10.1038/nmeth.1337. Epub 2009 May 31.
6
PELDOR spectroscopy distance fingerprinting of the octameric outer-membrane protein Wza from Escherichia coli.大肠杆菌八聚体外膜蛋白Wza的脉冲电子双共振光谱距离指纹分析
Angew Chem Int Ed Engl. 2009;48(16):2904-6. doi: 10.1002/anie.200805758.
7
Multifrequency electron spin resonance spectra of a spin-labeled protein calculated from molecular dynamics simulations.通过分子动力学模拟计算得到的自旋标记蛋白质的多频电子自旋共振光谱。
J Am Chem Soc. 2009 Feb 25;131(7):2597-605. doi: 10.1021/ja8073819.
8
Shigella type III secretion effectors: how, where, when, for what purposes?志贺氏菌III型分泌效应蛋白:如何、何处、何时以及为何目的?
Curr Opin Microbiol. 2009 Feb;12(1):110-6. doi: 10.1016/j.mib.2008.12.002. Epub 2009 Jan 20.
9
Structure and function of Salmonella SifA indicate that its interactions with SKIP, SseJ, and RhoA family GTPases induce endosomal tubulation.鼠伤寒沙门氏菌SifA的结构与功能表明,它与SKIP、SseJ以及RhoA家族GTP酶的相互作用会诱导内体形成微管。
Cell Host Microbe. 2008 Nov 13;4(5):434-46. doi: 10.1016/j.chom.2008.08.012.
10
A commonly used spin label: S-(2,2,5,5-tetramethyl-1-oxyl-delta3-pyrrolin-3-ylmethyl) methanethiosulfonate.一种常用的自旋标记物:S-(2,2,5,5-四甲基-1-氧化-Δ3-吡咯啉-3-基甲基)甲硫基磺酸盐。
Acta Crystallogr C. 2008 Nov;64(Pt 11):o586-9. doi: 10.1107/S0108270108032113. Epub 2008 Oct 18.