Department of Chemistry, Stanford University, Stanford, CA 94305, USA.
Curr Opin Struct Biol. 2011 Feb;21(1):4-11. doi: 10.1016/j.sbi.2010.10.006.
Protein folding is an important problem in structural biology with significant medical implications, particularly for misfolding disorders like Alzheimer's disease. Solving the folding problem will ultimately require a combination of theory and experiment, with theoretical models providing a comprehensive view of folding and experiments grounding these models in reality. Here we review progress towards this goal over the past decade, with an emphasis on recent theoretical advances that are empowering chemically detailed models of folding and the new results these technologies are providing. In particular, we discuss new insights made possible by Markov state models (MSMs), including the role of non-native contacts and the hub-like character of protein folded states.
蛋白质折叠是结构生物学中的一个重要问题,具有重要的医学意义,特别是对于阿尔茨海默病等错误折叠疾病。解决折叠问题最终需要理论和实验的结合,理论模型提供折叠的全面视图,实验将这些模型建立在现实基础上。在这里,我们回顾了过去十年在这一目标上取得的进展,重点介绍了最近的理论进展,这些进展使化学细节折叠模型和这些技术提供的新结果更具说服力。特别是,我们讨论了马尔可夫状态模型(MSMs)所带来的新见解,包括非天然接触的作用和蛋白质折叠状态的枢纽特征。