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结核分枝杆菌 GroEL 同源物的结构和功能保守性表明 GroEL1 是一种伴侣蛋白。

Structural and functional conservation of Mycobacterium tuberculosis GroEL paralogs suggests that GroEL1 Is a chaperonin.

机构信息

Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.

出版信息

J Mol Biol. 2011 Jan 21;405(3):831-9. doi: 10.1016/j.jmb.2010.11.021. Epub 2010 Nov 19.

Abstract

GroEL is a group I chaperonin that facilitates protein folding and prevents protein aggregation in the bacterial cytosol. Mycobacteria are unusual in encoding two or more copies of GroEL in their genome. While GroEL2 is essential for viability and likely functions as the general housekeeping chaperonin, GroEL1 is dispensable, but its structure and function remain unclear. Here, we present the 2.2-Å resolution crystal structure of a 23-kDa fragment of Mycobacterium tuberculosis GroEL1 consisting of an extended apical domain. Our X-ray structure of the GroEL1 apical domain closely resembles those of Escherichia coli GroEL and M. tuberculosis GroEL2, thus highlighting the remarkable structural conservation of bacterial chaperonins. Notably, in our structure, the proposed substrate-binding site of GroEL1 interacts with the N-terminal region of a symmetry-related neighboring GroEL1 molecule. The latter is consistent with the known GroEL apical domain function in substrate binding and is supported by results obtained from using peptide array technology. Taken together, these data show that the apical domains of M. tuberculosis GroEL paralogs are conserved in three-dimensional structure, suggesting that GroEL1, like GroEL2, is a chaperonin.

摘要

GroEL 是一种分子伴侣,属于 I 型伴侣素家族,能够辅助蛋白折叠,并防止细菌细胞质中的蛋白聚集。分枝杆菌在其基因组中编码两个或更多拷贝的 GroEL 是很常见的。GroEL2 对于生存是必不可少的,可能作为一般的管家伴侣素发挥作用,而 GroEL1 虽然是可有可无的,但它的结构和功能仍不清楚。在这里,我们呈现了分辨率为 2.2Å 的结核分枝杆菌 GroEL1 的 23kDa 片段的晶体结构,该片段由延伸的顶端结构域组成。我们的 GroEL1 顶端结构域的 X 射线结构与大肠杆菌 GroEL 和结核分枝杆菌 GroEL2 的结构非常相似,因此突出了细菌伴侣素的显著结构保守性。值得注意的是,在我们的结构中,GroEL1 的假定底物结合位点与对称相关的相邻 GroEL1 分子的 N 端区域相互作用。这与已知的 GroEL 顶端结构域在底物结合中的作用一致,并得到了使用肽阵列技术获得的结果的支持。总之,这些数据表明,结核分枝杆菌 GroEL 同源物的顶端结构域在三维结构上是保守的,这表明 GroEL1 与 GroEL2 一样,也是一种伴侣素。

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