Institute for Ageing and Health, Newcastle University, Campus for Ageing and Vitality, Newcastle upon Tyne, NE4 5PL, UK.
Philos Trans R Soc Lond B Biol Sci. 2011 Jan 12;366(1561):64-70. doi: 10.1098/rstb.2010.0275.
Ageing is intrinsically complex, being driven by multiple causal mechanisms. Each mechanism tends to be partially supported by data indicating that it has a role in the overall cellular and molecular pathways underlying the ageing process. However, the magnitude of this role is usually modest. The systems biology approach combines (i) data-driven modelling, often using the large volumes of data generated by functional genomics technologies, and (ii) hypothesis-driven experimental studies to investigate causal pathways and identify their parameter values in an unusually quantitative manner, which enables the contributions of individual mechanisms and their interactions to be better understood, and allows for the design of experiments explicitly to test the complex predictions arising from such models. A clear example of the success of the systems biology approach in unravelling the complexity of ageing can be seen in recent studies on cell replicative senescence, revealing interactions between mitochondrial dysfunction, telomere erosion and DNA damage. An important challenge also exists in connecting the network of (random) damage-driven proximate mechanisms of ageing with the higher level (genetically specified) signalling pathways that influence longevity. This connection is informed by actions of natural selection on the determinants of ageing and longevity.
衰老是一个内在复杂的过程,由多种因果机制驱动。每个机制都有一定的数据支持,表明其在衰老过程中的整体细胞和分子途径中发挥作用。然而,其作用的程度通常是适度的。系统生物学方法结合了(i)数据驱动的建模,通常使用功能基因组学技术产生的大量数据,以及(ii)假设驱动的实验研究,以调查因果途径,并以一种非常定量的方式识别其参数值,这使得个体机制及其相互作用的贡献能够得到更好的理解,并能够设计实验来明确测试这些模型产生的复杂预测。系统生物学方法在揭示衰老复杂性方面取得成功的一个明显例子可以在最近关于细胞复制性衰老的研究中看到,这些研究揭示了线粒体功能障碍、端粒磨损和 DNA 损伤之间的相互作用。一个重要的挑战也存在于将(随机)损伤驱动的衰老近因机制网络与影响寿命的更高层次(遗传指定)信号通路联系起来。这种联系是通过自然选择对衰老和寿命决定因素的作用来实现的。