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各种调控序列因TA/CG缺乏和TG/CT过量的普遍规则而失去其独特性。

Various regulatory sequences are deprived of their uniqueness by the universal rule of TA/CG deficiency and TG/CT excess.

作者信息

Ohno S, Yomo T

机构信息

Beckman Research Institute of the City of Hope, Duarte, CA 91010-0269.

出版信息

Proc Natl Acad Sci U S A. 1990 Feb;87(3):1218-22. doi: 10.1073/pnas.87.3.1218.

Abstract

The universal rule of TA/CG deficiency-TG/CT excess endures the extremely high mutation rate of a retrovirus (human immunodeficiency virus type 1) as well as methylation of CAG rather than CG in a plant (maize). Among the consistently abundant nucleotide oligomers, there are two complementary pairs of palindromic nucleotide pentamers containing TG and CA. Out of the CAGTG and CACTG pair emerged the heptameric pair for the long-distance recombination of immunoglobulin genes, CACAGTG and CACTGTG. Reflecting their origin, these heptamers are found everywhere in all DNA, and a substantial fraction of them are accompanied by nonameric components properly spaced from them. It appears that, were the recombination event not confined to B cells, results of illegitimate recombinations might be disastrous. The other pentameric pair is TGCAT and ATGCA. Out of this pair emerged the complementary pair of transcription enhancer decamers: TNATTTGCAT for immunoglobulin light chains and ATGCAAATNA for immunoglobulin heavy chains. Again reflecting their origin, these decamers are found everywhere in all DNA and some genes--for example, in the 3' flanking region of immunoglobulin heavy chain constant region--are accompanied by a downstream "TATA box." It seems that even with regard to the productively recombined immunoglobulin genes, misinitiation of enhanced transcription is a real possibility.

摘要

TA/CG缺失-TG/CT过量的普遍规律经受住了逆转录病毒(人类免疫缺陷病毒1型)极高的突变率以及植物(玉米)中CAG而非CG的甲基化。在持续丰富的核苷酸寡聚物中,有两对互补的含TG和CA的回文核苷酸五聚体。在CAGTG和CACTG这一对中产生了用于免疫球蛋白基因远距离重组的七聚体对,即CACAGTG和CACTGTG。反映其起源,这些七聚体在所有DNA中随处可见,并且其中很大一部分伴随着与其适当间隔的九聚体成分。似乎,如果重组事件不限于B细胞,非法重组的结果可能是灾难性的。另一对五聚体是TGCAT和ATGCA。从这一对中产生了转录增强子十聚体的互补对:免疫球蛋白轻链的TNATTTGCAT和免疫球蛋白重链的ATGCAAATNA。同样反映其起源,这些十聚体在所有DNA中随处可见,并且一些基因——例如,在免疫球蛋白重链恒定区的3'侧翼区域——伴随着下游的“TATA盒”。似乎即使对于有效重组的免疫球蛋白基因,增强转录的错误起始也是切实可能的。

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