Department of Microbiology & Immunology, University of California, San Francisco, San Francisco, California 94127, USA.
J Biol Chem. 2011 May 20;286(20):17495-502. doi: 10.1074/jbc.M110.212027. Epub 2011 Mar 28.
Protein degradation by eukaryotic proteasomes is a multi-step process involving substrate recognition, ATP-dependent unfolding, translocation into the proteolytic core particle, and finally proteolysis. To date, most investigations of proteasome function have focused on the first and the last steps in this process. Here we examine the relationship between the stability of a folded protein domain and its degradation rate. Test proteins were targeted to the proteasome independently of ubiquitination by directly tethering them to the protease. Degradation kinetics were compared for test protein pairs whose stability was altered by either point mutation or ligand binding, but were otherwise identical. In both intact cells and in reactions using purified proteasomes and substrates, increased substrate stability led to an increase in substrate turnover time. The steady-state time for degradation ranged from ∼5 min (dihydrofolate reductase) to 40 min (I27 domain of titin). ATP turnover was 110/min./proteasome, and was not markedly changed by substrate. Proteasomes engage tightly folded substrates in multiple iterative rounds of ATP hydrolysis, a process that can be rate-limiting for degradation.
真核蛋白酶体中的蛋白质降解是一个多步骤的过程,涉及底物识别、ATP 依赖性展开、转运到蛋白酶核心颗粒,最后进行蛋白水解。迄今为止,对蛋白酶体功能的大多数研究都集中在这个过程的第一和最后一步。在这里,我们研究了折叠蛋白结构域的稳定性与其降解速率之间的关系。通过直接将测试蛋白与蛋白酶连接,使它们独立于泛素化靶向蛋白酶体。比较了通过点突变或配体结合改变稳定性的测试蛋白对的降解动力学,但其他方面完全相同。在完整细胞中和使用纯化的蛋白酶体和底物的反应中,增加底物稳定性导致底物周转时间增加。降解的稳定状态时间范围从约 5 分钟(二氢叶酸还原酶)到 40 分钟(titin 的 I27 结构域)。ATP 周转率为每蛋白酶体 110/分钟,并且不受底物的明显影响。蛋白酶体使紧密折叠的底物多次参与 ATP 水解的迭代循环,这个过程可能是降解的限速步骤。