• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

哥伦比亚西北部间日疟原虫分离株的高遗传多态性。

High genetic polymorphism of relapsing P. vivax isolates in northwest Colombia.

机构信息

Grupo Salud y Comunidad, Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia.

出版信息

Acta Trop. 2011 Jul;119(1):23-9. doi: 10.1016/j.actatropica.2011.03.012. Epub 2011 Apr 7.

DOI:10.1016/j.actatropica.2011.03.012
PMID:21497586
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3485554/
Abstract

Genetic diversity of Plasmodium populations has been more extensively documented in Colombia for Plasmodium falciparum than for Plasmodium vivax. Recently, highly variable microsatellite markers have been described and used in population-level studies of genetic variation of P. vivax throughout the world. We applied this approach to understand the genetic structure of P. vivax populations and to identify recurrence-associated haplotypes. In this, three microsatellite markers of P. vivax were amplified and the combined size of the fragments was used to establish genotypes. Patients from an ongoing treatment efficacy trial who were kept either in endemic or non-endemic regions in the northwest of Colombia were included in the study. In total 58 paired clinical isolates, were amplified. A total of 54 haplotypes were observed among the two regions. Some haplotypes were exclusive to the endemic region where the highest degree of polymorphism was detected. In addition, we confirmed the different genotypes of recurrent-relapsing and primary infection isolates suggesting the activation of heterologous hypnozoite populations. We conclude that analysis of the three microsatellites is a valuable tool to establish the genetic characteristics of P. vivax populations in Colombia.

摘要

与恶性疟原虫(Plasmodium falciparum)相比,哥伦比亚对间日疟原虫(Plasmodium vivax)的种群遗传多样性有更广泛的记载。最近,高变异性微卫星标记已经被描述并用于世界各地间日疟原虫遗传变异的种群水平研究。我们应用这种方法来了解间日疟原虫种群的遗传结构,并确定与复发相关的单倍型。在本研究中,扩增了三个间日疟原虫微卫星标记,并使用片段的综合大小来建立基因型。本研究纳入了正在进行的疗效试验中的患者,这些患者分别来自哥伦比亚西北部的流行区和非流行区。共扩增了 58 对临床分离株。在这两个地区共观察到 54 种单倍型。一些单倍型是流行区所特有的,在那里检测到了最高程度的多态性。此外,我们还证实了复发-再燃和初次感染分离株的不同基因型,这表明异源休眠子群体被激活。我们的结论是,对这三个微卫星的分析是建立哥伦比亚间日疟原虫种群遗传特征的一种有价值的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07eb/3485554/47bd93f31c6a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07eb/3485554/f4401b301a2f/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07eb/3485554/b53096071f88/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07eb/3485554/3153e024a657/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07eb/3485554/47bd93f31c6a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07eb/3485554/f4401b301a2f/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07eb/3485554/b53096071f88/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07eb/3485554/3153e024a657/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/07eb/3485554/47bd93f31c6a/gr3.jpg

相似文献

1
High genetic polymorphism of relapsing P. vivax isolates in northwest Colombia.哥伦比亚西北部间日疟原虫分离株的高遗传多态性。
Acta Trop. 2011 Jul;119(1):23-9. doi: 10.1016/j.actatropica.2011.03.012. Epub 2011 Apr 7.
2
Population structure and transmission dynamics of Plasmodium vivax in the Republic of Korea based on microsatellite DNA analysis.基于微卫星 DNA 分析的韩国间日疟原虫种群结构和传播动力学。
PLoS Negl Trop Dis. 2012;6(4):e1592. doi: 10.1371/journal.pntd.0001592. Epub 2012 Apr 3.
3
Genetic variation and recurrent parasitaemia in Peruvian Plasmodium vivax populations.秘鲁间日疟原虫种群中的遗传变异和复发性寄生虫血症。
Malar J. 2014 Feb 24;13:67. doi: 10.1186/1475-2875-13-67.
4
Limited differentiation among Plasmodium vivax populations from the northwest and to the south Pacific Coast of Colombia: A malaria corridor?从哥伦比亚西北和太平洋海岸南部的间日疟原虫种群分化有限:疟疾走廊?
PLoS Negl Trop Dis. 2019 Mar 28;13(3):e0007310. doi: 10.1371/journal.pntd.0007310. eCollection 2019 Mar.
5
Nationwide genetic surveillance of Plasmodium vivax in Papua New Guinea reveals heterogeneous transmission dynamics and routes of migration amongst subdivided populations.在巴布亚新几内亚开展的全国范围的间日疟原虫基因监测揭示了在划分的人群中存在异质传播动力学和迁徙途径。
Infect Genet Evol. 2018 Mar;58:83-95. doi: 10.1016/j.meegid.2017.11.028. Epub 2017 Dec 5.
6
Microsatellite genotyping of Plasmodium vivax infections and their relapses in pregnant and non-pregnant patients on the Thai-Myanmar border.中缅边境地区孕妇和非孕妇感染疟原虫 vivax 微卫星基因分型及其复发。
Malar J. 2013 Aug 6;12:275. doi: 10.1186/1475-2875-12-275.
7
Using Amplicon Deep Sequencing to Detect Genetic Signatures of Plasmodium vivax Relapse.使用扩增子深度测序检测间日疟原虫复发的基因特征。
J Infect Dis. 2015 Sep 15;212(6):999-1008. doi: 10.1093/infdis/jiv142. Epub 2015 Mar 6.
8
Microsatellite loci: determining the genetic variability of Plasmodium vivax.微卫星位点:检测间日疟原虫的遗传变异性。
Trop Med Int Health. 2010 Jun;15(6):718-26. doi: 10.1111/j.1365-3156.2010.02535.x. Epub 2010 Apr 6.
9
Microsatellite Genotyping of Plasmodium vivax Isolates from Pregnant Women in Four Malaria Endemic Countries.四个疟疾流行国家孕妇间日疟原虫分离株的微卫星基因分型
PLoS One. 2016 Mar 24;11(3):e0152447. doi: 10.1371/journal.pone.0152447. eCollection 2016.
10
Molecular and epidemiological characterization of Plasmodium vivax recurrent infections in southern Mexico.墨西哥南部间日疟原虫再燃感染的分子和流行病学特征。
Parasit Vectors. 2013 Apr 18;6:109. doi: 10.1186/1756-3305-6-109.

引用本文的文献

1
Genetic diversity of isolates from pregnant women in the Western Brazilian Amazon: a prospective cohort study.巴西亚马孙西部地区孕妇分离株的遗传多样性:一项前瞻性队列研究。
Lancet Reg Health Am. 2022 Dec 2;18:100407. doi: 10.1016/j.lana.2022.100407. eCollection 2023 Feb.
2
Population-level genome-wide STR discovery and validation for population structure and genetic diversity assessment of Plasmodium species.人群水平全基因组 STR 发现和验证,用于评估疟原虫物种的种群结构和遗传多样性。
PLoS Genet. 2022 Jan 10;18(1):e1009604. doi: 10.1371/journal.pgen.1009604. eCollection 2022 Jan.
3
Resolving the cause of recurrent Plasmodium vivax malaria probabilistically.

本文引用的文献

1
Plasmodium vivax sub-patent infections after radical treatment are common in Peruvian patients: results of a 1-year prospective cohort study.根治治疗后疟原虫 vivax 亚临床感染在秘鲁患者中很常见:一项为期 1 年的前瞻性队列研究结果。
PLoS One. 2011 Jan 28;6(1):e16257. doi: 10.1371/journal.pone.0016257.
2
Antigenic diversity of the Plasmodium vivax circumsporozoite protein in parasite isolates of Western Colombia.哥伦比亚西部寄生虫分离株中间日疟原虫环子孢子蛋白的抗原多样性。
Am J Trop Med Hyg. 2011 Feb;84(2 Suppl):51-7. doi: 10.4269/ajtmh.2011.09-0785.
3
Single-nucleotide polymorphism, linkage disequilibrium and geographic structure in the malaria parasite Plasmodium vivax: prospects for genome-wide association studies.
概率解决间日疟原虫疟疾复发的原因。
Nat Commun. 2019 Dec 6;10(1):5595. doi: 10.1038/s41467-019-13412-x.
4
Biology: Insights Provided by Genomics, Transcriptomics and Proteomics.生物学:基因组学、转录组学和蛋白质组学提供的见解。
Front Cell Infect Microbiol. 2018 Feb 8;8:34. doi: 10.3389/fcimb.2018.00034. eCollection 2018.
5
Molecular and immunological analyses of confirmed Plasmodium vivax relapse episodes.间日疟原虫确诊复发病例的分子和免疫学分析。
Malar J. 2017 May 30;16(1):228. doi: 10.1186/s12936-017-1877-x.
6
High Efficacy of Primaquine Treatment for Plasmodium vivax in Western Thailand.伯氨喹治疗泰国西部间日疟原虫的高效性
Am J Trop Med Hyg. 2016 Nov 2;95(5):1086-1089. doi: 10.4269/ajtmh.16-0410. Epub 2016 Sep 6.
7
Variation in Human Cytochrome P-450 Drug-Metabolism Genes: A Gateway to the Understanding of Plasmodium vivax Relapses.人类细胞色素P-450药物代谢基因的变异:理解间日疟原虫复发的关键
PLoS One. 2016 Jul 28;11(7):e0160172. doi: 10.1371/journal.pone.0160172. eCollection 2016.
8
Assessment of an automated capillary system for Plasmodium vivax microsatellite genotyping.间日疟原虫微卫星基因分型自动化毛细管系统的评估
Malar J. 2015 Aug 21;14:326. doi: 10.1186/s12936-015-0842-9.
9
Plasmodium vivax Diversity and Population Structure across Four Continents.四大洲间间日疟原虫的多样性与种群结构
PLoS Negl Trop Dis. 2015 Jun 30;9(6):e0003872. doi: 10.1371/journal.pntd.0003872. eCollection 2015.
10
The utility of genomic data for Plasmodium vivax population surveillance.基因组数据在间日疟原虫群体监测中的应用。
Pathog Glob Health. 2015 May;109(3):153-61. doi: 10.1179/2047773215Y.0000000014. Epub 2015 Apr 18.
单核苷酸多态性、连锁不平衡与间日疟原虫地理结构:全基因组关联研究的前景。
BMC Genet. 2010 Jul 13;11:65. doi: 10.1186/1471-2156-11-65.
4
Microsatellite loci: determining the genetic variability of Plasmodium vivax.微卫星位点:检测间日疟原虫的遗传变异性。
Trop Med Int Health. 2010 Jun;15(6):718-26. doi: 10.1111/j.1365-3156.2010.02535.x. Epub 2010 Apr 6.
5
Limited genetic polymorphism of the Plasmodium vivax low molecular weight rhoptry protein complex in the Colombian population.哥伦比亚人群中间日疟原虫低分子量裂殖体蛋白复合物的遗传多态性有限。
Infect Genet Evol. 2010 Mar;10(2):261-7. doi: 10.1016/j.meegid.2009.12.004. Epub 2009 Dec 22.
6
Recurrent parasitemias and population dynamics of Plasmodium vivax polymorphisms in rural Amazonia.农村亚马逊地区间日疟原虫的复发性寄生虫血症和种群动态。
Am J Trop Med Hyg. 2009 Dec;81(6):961-8. doi: 10.4269/ajtmh.2009.09-0337.
7
Prevention of Plasmodium vivax malaria recurrence: efficacy of the standard total dose of primaquine administered over 3 days.间日疟疟疾复发的预防:3天内给予标准总剂量伯氨喹的疗效
Acta Trop. 2009 Nov;112(2):188-92. doi: 10.1016/j.actatropica.2009.07.024. Epub 2009 Aug 3.
8
Arlequin (version 3.0): an integrated software package for population genetics data analysis.Arlequin(版本 3.0):一个用于群体遗传学数据分析的集成软件包。
Evol Bioinform Online. 2007 Feb 23;1:47-50.
9
A closer look at multiple-clone Plasmodium vivax infections: detection methods, prevalence and consequences.深入研究间日疟原虫多重克隆感染:检测方法、流行率及后果
Mem Inst Oswaldo Cruz. 2009 Feb;104(1):67-73. doi: 10.1590/s0074-02762009000100011.
10
Methemoglobinemia and adverse events in Plasmodium vivax malaria patients associated with high doses of primaquine treatment.间日疟原虫疟疾患者高剂量伯氨喹治疗相关的高铁血红蛋白血症及不良事件。
Am J Trop Med Hyg. 2009 Feb;80(2):188-93.