Department of Tropical Medicine and Malaria, Research Institute, National Center for Global Health and Medicine, Shinjuku, Tokyo, Japan.
PLoS Negl Trop Dis. 2012;6(4):e1592. doi: 10.1371/journal.pntd.0001592. Epub 2012 Apr 3.
In order to control malaria, it is important to understand the genetic structure of the parasites in each endemic area. Plasmodium vivax is widely distributed in the tropical to temperate regions of Asia and South America, but effective strategies for its elimination have yet to be designed. In South Korea, for example, indigenous vivax malaria was eliminated by the late 1970s, but re-emerged from 1993. We estimated the population structure and temporal dynamics of transmission of P. vivax in South Korea using microsatellite DNA markers.
METHODOLOGY/PRINCIPAL FINDINGS: We analyzed 255 South Korean P. vivax isolates collected from 1994 to 2008, based on 10 highly polymorphic microsatellite DNA loci of the P. vivax genome. Allelic data were obtained for the 87 isolates and their microsatellite haplotypes were determined based on a combination of allelic data of the loci. In total, 40 haplotypes were observed. There were two predominant haplotypes: H16 and H25. H16 was observed in 9 isolates (10%) from 1996 to 2005, and H25 in 27 (31%) from 1995 to 2003. These results suggested that the recombination rate of P. vivax in South Korea, a temperate country, was lower than in tropical areas where identical haplotypes were rarely seen in the following year. Next, we estimated the relationships among the 40 haplotypes by eBURST analysis. Two major groups were found: one composed of 36 isolates (41%) including H25; the other of 20 isolates (23%) including H16. Despite the low recombination rate, other new haplotypes that are genetically distinct from the 2 groups have also been observed since 1997 (H27).
CONCLUSIONS/SIGNIFICANCE: These results suggested a continual introduction of P. vivax from other population sources, probably North Korea. Molecular epidemiology using microsatellite DNA of the P. vivax population is effective for assessing the population structure and transmission dynamics of the parasites--information that can assist in the elimination of vivax malaria in endemic areas.
为了控制疟疾,了解每个流行地区寄生虫的遗传结构非常重要。间日疟原虫广泛分布在亚洲和南美洲的热带和温带地区,但尚未设计出有效的消除方法。例如,韩国在 20 世纪 70 年代末消除了本地间日疟,但从 1993 年开始再次出现。我们使用微卫星 DNA 标记估计了韩国间日疟原虫的种群结构和传播的时间动态。
方法/主要发现:我们分析了 1994 年至 2008 年间从韩国采集的 255 株间日疟原虫分离株,这些分离株基于间日疟原虫基因组的 10 个高度多态性微卫星 DNA 位点。获得了 87 个分离株的等位基因数据,并根据这些位点的等位基因数据组合确定了微卫星单倍型。总共观察到 40 种单倍型。存在两种主要的单倍型:H16 和 H25。H16 见于 1996 年至 2005 年的 9 个分离株(10%),H25 见于 1995 年至 2003 年的 27 个分离株(31%)。这些结果表明,在韩国这个温带国家,间日疟原虫的重组率低于热带地区,在热带地区,次年很少见到相同的单倍型。接下来,我们通过 eBURST 分析估计了 40 种单倍型之间的关系。发现了两个主要群体:一个由包括 H25 在内的 36 个分离株(41%)组成;另一个由包括 H16 在内的 20 个分离株(23%)组成。尽管重组率较低,但自 1997 年以来,也观察到了其他与这两个群体在遗传上不同的新单倍型(H27)。
结论/意义:这些结果表明,间日疟原虫不断从其他种群来源传入,可能来自朝鲜。使用间日疟原虫种群的微卫星 DNA 进行分子流行病学分析,对于评估寄生虫的种群结构和传播动态非常有效,这些信息有助于在流行地区消除间日疟。