Department of Biology, Faculty of Arts and Science, Ondokuz Mayis University, 55139 Kurupelit-Samsun, Turkey.
Int J Syst Evol Microbiol. 2012 Jun;62(Pt 6):1228-1234. doi: 10.1099/ijs.0.031559-0. Epub 2011 Jul 8.
The taxonomic position of two soil actinomycetes, strains A2012(T) and A2019(T), isolated from Turkish soils, was determined using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that the strains belonged to the family Nocardiaceae. Strains A2012(T) and A2019(T) were most closely related to Nocardia caishijiensis DSM 44831(T) (98.9 %) and Nocardia mexicana CIP 108295(T) (98.6 %), respectively; similarity to other type strains of the genus Nocardia ranged from 96.9 to 97.9 %. However, DNA-DNA relatedness and phenotypic data demonstrated that strains A2012(T) and A2019(T) could be clearly distinguished from members of the most closely related Nocardia species. It is evident from the genotypic and phenotypic data that the two isolates represent two novel species of the genus Nocardia. It is proposed, therefore, that strains A2012(T) and A2019(T) be classified in the genus Nocardia as representatives of Nocardia goodfellowii sp. nov. (type strain A2012(T) = DSM 45516(T) = NRRL B-24833(T) = KCTC 19986(T)) and Nocardia thraciensis sp. nov. (type strain A2019(T) = DSM 45517(T) = NRRL B-24834(T) = KCTC 19985(T)), respectively.
两株土壤放线菌菌株 A2012(T)和 A2019(T),从土耳其土壤中分离得到,采用多相分类法确定其分类地位。比较 16S rRNA 基因序列分析表明,这些菌株属于诺卡氏菌科。菌株 A2012(T)和 A2019(T)与 Nocardia caishijiensis DSM 44831(T)(98.9%)和 Nocardia mexicana CIP 108295(T)(98.6%)最为密切相关;与属内其他模式菌株的相似性范围为 96.9%至 97.9%。然而,DNA-DNA 同源性和表型数据表明,菌株 A2012(T)和 A2019(T)可明显区别于亲缘关系最密切的 Nocardia 种的成员。从基因型和表型数据可以明显看出,这两个分离株代表了 Nocardia 属的两个新种。因此,建议菌株 A2012(T)和 A2019(T)被分类到 Nocardia 属中,分别作为 Nocardia goodfellowii sp. nov.(模式菌株 A2012(T)=DSM 45516(T)=NRRL B-24833(T)=KCTC 19986(T))和 Nocardia thraciensis sp. nov.(模式菌株 A2019(T)=DSM 45517(T)=NRRL B-24834(T)=KCTC 19985(T))的代表。