Lamm Andrew S, Khare Arshdeep, Conville Patricia, Lau Peter C K, Bergeron Hélène, Rosazza John P N
Center for Biocatalysis and Bioprocessing, 2501 Crosspark Road, Suite C100 Oakdale Research Park, University of Iowa, Iowa City, IA 52242-5000, USA.
Int J Syst Evol Microbiol. 2009 Oct;59(Pt 10):2408-14. doi: 10.1099/ijs.0.007427-0. Epub 2009 Jul 21.
Nocardia strain NRRL 5646, isolated from a garden soil sample in Osceola, Iowa, USA, was initially of interest as an antibiotic producer. It contained biocatalytically important enzymes and represented the first described nitric oxide synthase enzyme system in bacteria. The present polyphasic taxonomic study was undertaken to differentiate strain NRRL 5646(T) from related species of the genus Nocardia. Chemotaxonomic analyses included determinations of the fatty acid methyl ester profile (C(16 : 1)omega6c/C(16 : 1)omega7c, C(16 : 0), C(18 : 1)omega9c and C(18 : 0) 10-methyl as major components), quinone [cyclo MK-8(H(4)) as the major component], polar lipid (diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol and phosphatidylinositol mannoside as major components) and mycolic acid. These results supported its placement within the genus Nocardia. Biochemical testing and 16S rRNA, 65-kDa heat-shock protein (hsp65) and preprotein translocase (secA1) gene sequence analyses differentiated strain NRRL 5646(T) from recognized Nocardia species. Previous studies have demonstrated that other genetic sequences (carboxylic acid reductase, Nocardia phosphopantetheinyl transferase and GTP cyclohydrolase I) from strain NRRL 5646(T) can also be used to substantiate its uniqueness. The level of 16S rRNA gene sequence similarity between strain NRRL 5646(T) and the type strains of Nocardia tenerifensis and Nocardia brasiliensis was 98.8 %. However, strain NRRL 5646(T) could be clearly distinguished from these Nocardia species based on DNA-DNA hybridization data. Consequently, strain NRRL 5646(T) is considered to represent a novel species of the genus Nocardia, for which the name Nocardia iowensis sp. nov. is proposed. The type strain is NRRL 5646(T) (=UI 122540(T)=NRRL B-24671(T)=DSM 45197(T)).
从美国爱荷华州奥西奥拉的一份花园土壤样本中分离出的诺卡氏菌菌株NRRL 5646,最初因其作为抗生素产生菌而受到关注。它含有具有生物催化重要性的酶,并代表了细菌中首次描述的一氧化氮合酶酶系统。进行了本次多相分类学研究,以区分菌株NRRL 5646(T)与诺卡氏菌属的相关物种。化学分类分析包括测定脂肪酸甲酯谱(以C(16 : 1)ω6c/C(16 : 1)ω7c、C(16 : 0)、C(18 : 1)ω9c和10-甲基C(18 : 0)为主要成分)、醌类[以环MK-8(H(4))为主要成分]、极性脂质(以二磷脂酰甘油、磷脂酰乙醇胺、磷脂酰肌醇和磷脂酰肌醇甘露糖苷为主要成分)和分枝菌酸。这些结果支持将其归入诺卡氏菌属。生化测试以及16S rRNA、65 kDa热休克蛋白(hsp65)和前体蛋白转位酶(secA1)基因序列分析将菌株NRRL 5646(T)与已确认的诺卡氏菌物种区分开来。先前的研究表明,菌株NRRL 5646(T)的其他基因序列(羧酸还原酶、诺卡氏菌磷酸泛酰巯基乙胺基转移酶和GTP环水解酶I)也可用于证实其独特性。菌株NRRL 5646(T)与嗜热诺卡氏菌和巴西诺卡氏菌模式菌株之间的16S rRNA基因序列相似性水平为98.8%。然而,根据DNA-DNA杂交数据,菌株NRRL 5646(T)可与这些诺卡氏菌物种明显区分开来。因此,菌株NRRL 5646(T)被认为代表诺卡氏菌属的一个新物种,为此提出名称诺卡氏菌爱荷华种(Nocardia iowensis sp. nov.)。模式菌株为NRRL 5646(T)(=UI 122540(T)=NRRL B-24671(T)=DSM 45197(T))。