• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

两段新的完整基因组序列为植物病原黄单胞菌属的宿主和组织特异性提供了新的见解。

Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp.

机构信息

Department of Plant Pathology, Iowa State University, 351 Bessey Hall, Iowa State University, Ames, IA 50011, USA.

出版信息

J Bacteriol. 2011 Oct;193(19):5450-64. doi: 10.1128/JB.05262-11. Epub 2011 Jul 22.

DOI:10.1128/JB.05262-11
PMID:21784931
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3187462/
Abstract

Xanthomonas is a large genus of bacteria that collectively cause disease on more than 300 plant species. The broad host range of the genus contrasts with stringent host and tissue specificity for individual species and pathovars. Whole-genome sequences of Xanthomonas campestris pv. raphani strain 756C and X. oryzae pv. oryzicola strain BLS256, pathogens that infect the mesophyll tissue of the leading models for plant biology, Arabidopsis thaliana and rice, respectively, were determined and provided insight into the genetic determinants of host and tissue specificity. Comparisons were made with genomes of closely related strains that infect the vascular tissue of the same hosts and across a larger collection of complete Xanthomonas genomes. The results suggest a model in which complex sets of adaptations at the level of gene content account for host specificity and subtler adaptations at the level of amino acid or noncoding regulatory nucleotide sequence determine tissue specificity.

摘要

黄单胞菌是一个大型细菌属,共同导致 300 多种植物物种发病。该属的宿主范围广泛,而个别物种和致病变种的宿主和组织特异性则非常严格。分别感染植物生物学主要模式植物拟南芥和水稻的叶肉组织的黄单胞菌野油菜致病变种 756C 菌株和水稻黄单胞菌致病变种 BLS256 菌株的全基因组序列已被确定,并深入了解了宿主和组织特异性的遗传决定因素。与感染同一宿主维管束组织的密切相关菌株的基因组进行了比较,并对更大的完整黄单胞菌基因组集进行了比较。结果表明,在基因含量水平上的复杂适应集解释了宿主特异性,而在氨基酸或非编码调节核苷酸序列水平上的更细微适应决定了组织特异性。

相似文献

1
Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp.两段新的完整基因组序列为植物病原黄单胞菌属的宿主和组织特异性提供了新的见解。
J Bacteriol. 2011 Oct;193(19):5450-64. doi: 10.1128/JB.05262-11. Epub 2011 Jul 22.
2
A two-genome microarray for the rice pathogens Xanthomonas oryzae pv. oryzae and X. oryzae pv. oryzicola and its use in the discovery of a difference in their regulation of hrp genes.一种用于水稻病原菌水稻白叶枯病菌和水稻细菌性条斑病菌的双基因组微阵列及其在发现它们对hrp基因调控差异中的应用。
BMC Microbiol. 2008 Jun 18;8:99. doi: 10.1186/1471-2180-8-99.
3
Variation suggestive of horizontal gene transfer at a lipopolysaccharide (lps) biosynthetic locus in Xanthomonas oryzae pv. oryzae, the bacterial leaf blight pathogen of rice.在水稻白叶枯病菌——稻黄单胞菌水稻致病变种的脂多糖(lps)生物合成位点处,存在提示水平基因转移的变异。
BMC Microbiol. 2004 Oct 9;4:40. doi: 10.1186/1471-2180-4-40.
4
Genome mining reveals the genus Xanthomonas to be a promising reservoir for new bioactive non-ribosomally synthesized peptides.基因组挖掘揭示,黄单胞菌属是新型生物活性非核糖体合成肽的有前途的蕴藏库。
BMC Genomics. 2013 Sep 27;14:658. doi: 10.1186/1471-2164-14-658.
5
The role of horizontal transfer in the evolution of a highly variable lipopolysaccharide biosynthesis locus in xanthomonads that infect rice, citrus and crucifers.水平转移在感染水稻、柑橘和十字花科植物的黄单胞菌中高度可变的脂多糖生物合成基因座进化中的作用。
BMC Evol Biol. 2007 Dec 6;7:243. doi: 10.1186/1471-2148-7-243.
6
Deep Population Genomics Reveals Systematic and Parallel Evolution at a Lipopolysaccharide Biosynthetic Locus in Pathogens That Infect Rice and Sugarcane.深度群体基因组学揭示了感染水稻和甘蔗的病原体中脂多糖生物合成基因座的系统性和并行进化。
Appl Environ Microbiol. 2022 Aug 23;88(16):e0055022. doi: 10.1128/aem.00550-22. Epub 2022 Aug 2.
7
Identification and Characterization of Two Novel DSF-Controlled Virulence-Associated Genes Within the nodB-rhgB Locus of Xanthomonas oryzae pv. oryzicola Rs105.水稻细菌性条斑病菌Rs105中nodB-rhgB基因座内两个新型DSF调控的毒力相关基因的鉴定与表征
Phytopathology. 2015 May;105(5):588-96. doi: 10.1094/PHYTO-07-14-0190-R.
8
Interaction of Xanthomonas campestris with Arabidopsis thaliana: characterization of a gene from X. c. pv. raphani that confers avirulence to most A. thaliana accessions.野油菜黄单胞菌与拟南芥的相互作用:野油菜黄单胞菌萝卜致病变种中一个赋予大多数拟南芥种质无毒力的基因的特性分析
Mol Plant Microbe Interact. 1993 Mar-Apr;6(2):216-24. doi: 10.1094/mpmi-6-216.
9
The translucens group of Xanthomonas translucens: Complicated and important pathogens causing bacterial leaf streak on cereals.黄单胞菌 translucent 组:复杂且重要的病原菌,可引起谷物细菌性条斑病。
Mol Plant Pathol. 2020 Mar;21(3):291-302. doi: 10.1111/mpp.12909. Epub 2020 Jan 21.
10
AvrXa7-Xa7 mediated defense in rice can be suppressed by transcriptional activator-like effectors TAL6 and TAL11a from Xanthomonas oryzae pv. oryzicola.水稻中AvrXa7-Xa7介导的防御反应可被来自水稻细菌性条斑病菌的转录激活样效应因子TAL6和TAL11a抑制。
Mol Plant Microbe Interact. 2014 Sep;27(9):983-95. doi: 10.1094/MPMI-09-13-0279-R.

引用本文的文献

1
Functional study of FleQ reveals the co-regulation of by operon members in subsp. .FleQ的功能研究揭示了在铜绿假单胞菌亚种中,操纵子成员对……的共同调控。 (原文中部分内容缺失,翻译可能不太完整准确)
iScience. 2025 Jun 19;28(7):112960. doi: 10.1016/j.isci.2025.112960. eCollection 2025 Jul 18.
2
Activation of three targets by a TAL effector confers susceptibility to bacterial blight of cotton.一个转录激活样效应因子激活三个靶标会使棉花对细菌性枯萎病易感。
Nat Commun. 2025 Jan 14;16(1):644. doi: 10.1038/s41467-025-55926-7.
3
An insight into pathogenicity and virulence gene content of spp. and its biocontrol strategies.对[物种名称]的致病性和毒力基因内容及其生物防治策略的洞察。 (注:原文中“ spp.”表述有误,推测应该是具体的物种学名,这里按照正确理解翻译,若原文有误请自行核对修正)
Heliyon. 2024 Jul 8;10(14):e34275. doi: 10.1016/j.heliyon.2024.e34275. eCollection 2024 Jul 30.
4
ScAnalyzer: an image processing tool to monitor plant disease symptoms and pathogen spread in Arabidopsis thaliana leaves.ScAnalyzer:一种用于监测拟南芥叶片中植物病害症状和病原体传播的图像处理工具。
Plant Methods. 2024 May 31;20(1):80. doi: 10.1186/s13007-024-01213-3.
5
sp. nov., a non-pathogenic member of Group 1 .新种,第 1 组的非致病性成员。
Int J Syst Evol Microbiol. 2024 Mar;74(3). doi: 10.1099/ijsem.0.006294.
6
Identification of QTLs Conferring Resistance to Bacterial Diseases in Rice.水稻中赋予对细菌性疾病抗性的数量性状基因座的鉴定
Plants (Basel). 2023 Aug 2;12(15):2853. doi: 10.3390/plants12152853.
7
Pangenome insights into the diversification and disease specificity of worldwide outbreaks.泛基因组对全球疫情的多样性和疾病特异性的见解。
Front Microbiol. 2023 Jul 5;14:1213261. doi: 10.3389/fmicb.2023.1213261. eCollection 2023.
8
Complete genome sequence of an Israeli isolate of pv. pelargonii strain 305 and novel type III effectors identified in .以色列天竺葵致病变种菌株305的一个分离株的全基因组序列以及在其中鉴定出的新型III型效应子 。
Front Plant Sci. 2023 Jun 2;14:1155341. doi: 10.3389/fpls.2023.1155341. eCollection 2023.
9
Assembling highly repetitive Xanthomonas TALomes using Oxford Nanopore sequencing.使用 Oxford Nanopore 测序组装高度重复的黄单胞菌 TALomes。
BMC Genomics. 2023 Mar 27;24(1):151. doi: 10.1186/s12864-023-09228-1.
10
Pv. Response Regulator VemR Is Co-opted by the Sensor Kinase CheA for Phosphorylation of Multiple Pathogenicity-Related Targets.恶性疟原虫反应调节因子VemR被传感激酶CheA用于多个致病性相关靶点的磷酸化。
Front Microbiol. 2022 Jun 9;13:928551. doi: 10.3389/fmicb.2022.928551. eCollection 2022.

本文引用的文献

1
Conflict between Amino Acid and Nucleotide Characters.氨基酸与核苷酸特征之间的冲突。
Cladistics. 2002 Apr;18(2):200-206. doi: 10.1111/j.1096-0031.2002.tb00148.x.
2
Genome sequencing and comparative analysis of the carrot bacterial blight pathogen, Xanthomonas hortorum pv. carotae M081, for insights into pathogenicity and applications in molecular diagnostics.对胡萝卜细菌性黑斑病病原菌,野油菜黄单胞菌胡萝卜亚种 M081 的基因组测序和比较分析,以深入了解其致病性,并应用于分子诊断。
Mol Plant Pathol. 2011 Aug;12(6):580-94. doi: 10.1111/j.1364-3703.2010.00694.x. Epub 2011 Jan 17.
3
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.MEGA5:用于最大似然法、进化距离法和最大简约法的分子进化遗传学分析。
Mol Biol Evol. 2011 Oct;28(10):2731-9. doi: 10.1093/molbev/msr121. Epub 2011 May 4.
4
Genomic analysis of Xanthomonas oryzae isolates from rice grown in the United States reveals substantial divergence from known X. oryzae pathovars.对美国种植水稻上分离的黄单胞菌菌株的基因组分析表明,其与已知的黄单胞菌致病变种存在显著差异。
Appl Environ Microbiol. 2011 Jun;77(12):3930-7. doi: 10.1128/AEM.00028-11. Epub 2011 Apr 22.
5
Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper.比较基因组学揭示了感染番茄和辣椒的黄单胞菌之间的多样性。
BMC Genomics. 2011 Mar 11;12:146. doi: 10.1186/1471-2164-12-146.
6
Sensing and adhesion are adaptive functions in the plant pathogenic xanthomonads.感应和黏附是植物病原黄单胞菌的适应性功能。
BMC Evol Biol. 2011 Mar 11;11:67. doi: 10.1186/1471-2148-11-67.
7
VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R.VennDiagram:一个用于在 R 语言中生成高度可定制的 Venn 和 Euler 图的软件包。
BMC Bioinformatics. 2011 Jan 26;12:35. doi: 10.1186/1471-2105-12-35.
8
Secretion, modification, and regulation of Ax21.Ax21 的分泌、修饰和调节。
Curr Opin Microbiol. 2011 Feb;14(1):62-7. doi: 10.1016/j.mib.2010.12.006. Epub 2011 Jan 12.
9
A multilocus sequence analysis of Xanthomonas campestris reveals a complex structure within crucifer-attacking pathovars of this species.黄单胞菌属的多位点序列分析揭示了该物种中十字花科致病菌的复杂结构。
Syst Appl Microbiol. 2011 Apr;34(2):156-65. doi: 10.1016/j.syapm.2010.09.001. Epub 2010 Dec 30.
10
Genome-wide sequencing data reveals virulence factors implicated in banana Xanthomonas wilt.全基因组测序数据揭示了与香蕉黄单胞菌萎蔫病相关的毒力因子。
FEMS Microbiol Lett. 2010 Sep 1;310(2):182-92. doi: 10.1111/j.1574-6968.2010.02065.x. Epub 2010 Jul 15.